| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0929 |
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| Symbol | |
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| ID | 4460344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1141534 |
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| End bp | 1144545 |
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| Gene Length | 3012 bp |
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| Protein Length | 1003 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639701692 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_845060 |
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| Protein GI | 116748373 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGAAA CGTTCGTTCA TCTGCACGTC CACTCCCATT ATTCCATGAT GCGCGGGGTC
AGTTCCGTGA CGGCCCTCTG CCGGACCGCA TCGGCCCTGG GTTTCGAACA CCTGGCGCTG
ACCGACGACA AAGGATTCTA CGGGCTGATC AACTTCCTCG ACGCCGCCCG ACGCTTCGGC
ATTCATCCCA TCGTGGGCAC GACCATCGGA ACCGGCCCCG ATACCGCAGT CGTTCTCGCC
AAAACTCCGC GGGGCTATGA ATTGCTCTCC GAGCTGACCA CCCGCCGTCA CCTGGACGCG
GATTTTTCCC TGCTGCGCGA TTTTCCCGAC GGCCGGCGGG ATCTTGTCGT GCTCACCGCC
AACCCCGAAA TCATCAAAGC CCTGCACCCG CGGCGGGAAT GCGGGGTGGA GGTCGTTCCG
GGACCCGGGG ACCGGCGGCT GCTGAAAATG GCCCATAGCC TCGGCGTCCC GCCCGTTGCC
ACGAATGCCG TTCATTTCGC GCACTTGGAA GATTATTCCC TGCACCGGCT GGTCCGCGCC
ATCGATCTCA ACCTGACTCT GAGCAACATT CCCCGGGAGG AGATCGTACG GCCCGACCAG
TGGCTGCAAT CCGCGGCGCA GATGGAGCGC CGTCTGCCGC ATTGTCCGGA AGCCCTGGCG
AACACCCTCA AACTGGCGGG AGAGTGCCAC ACGAAATGGG ACCATTTCCG CACCATTTTC
CCGCATTACC GCGACCGGCG GGAAGACCAC TTCGCTCTGC TGCTCGAGAA ATGCCGCAAG
GGAATCTCCT GGCGCTACGG CCGGACGAGC CCGGCCGTCG AGGAACGACT GGCCGAGGAA
CTCGACCTGA TCGGAGCCAA GGGATACGTG GATTACTTTC TCGTCGTGGC CGATATCGTC
GGCCGCCGGC CGATTCACTG CGGTCGCGGG AGCGGCGCCG CGAGCCTGGT GAGCTACCTG
CTCGGGATCA CCCACGTGGA TCCCCTTCGG CACAACCTCC TGTTCGGAAG GTTTCTGAAT
CCCGAACGAA AGGATCTGCC GGACATCGAT GTCGATTTCC CATGGGACGA ACGCGACGAT
TTGTTCGAAG AACTGCGTCG TCACTACGGC GCCGAACGGA TGGCGACGGT TGCCAATCAC
GTGGGTTTCG GAGCGCGCGC GGCGGTGCGG GAGGTGGCCA GGGTCTACGG CGTCCCGGCG
GCGGAAATCA AGGAGGTGAC CCGGCGCATG AGCTTCTGGA CGGAACCGGG AGCAATGTGG
GAGCGCATCG GCACCCATCC GAAATTCCGC GGATTCCCGC TCGATCCCCC CTGGCCGGAG
ATCATCGACC TGGCCGGCCG GTTGGAATCC TTGCCGAGAC ACCTTTCCAT GCATTGCGGA
GGGGTCATCA TCGCCCCCGA CCGAATTTCC CGGCACGTCC CCGTGCAGCG GAGCGCCAAG
GGCGCCCGGA TCATCCAATG GGAAAAGGAC CAGGCGGAAA AGGCCGGCCT GGTGAAGATC
GATCTCCTGG GCAACCGTTC CCTGGCCGTC ATTCGGGACT CCCTTGCCGC CATCCGGGAA
AATTACGGAA AAGACCTGGA ATACGCCCGC CTCAATCCCG TCGATGACCC GGATACCCGG
GAGCAAATCA GGACCGGCCG CACCATGGGG GTTTTCTACG TGGAATCGCC GGCCATGAGG
CTCCTGCAGC AAAAGGCCGG CTGCGGCGAC TTCGAGCATC TCGTCATCCA TTCGTCCATC
ATCCGGCCGG CGGCCAACCG GTACATCCGG GATTACCTGG ACCGGCTGCA CGGAGCGCCC
TATGAACCGC TTCATCCGAG CCTCGCGGGA CTGCTCGCCG AAAACTACGG CATTCTCGTC
TACCAGGAGG ACGTGGTGCA GGCGGCCATG ATCCTGGCGG GGTTCAGCTG GGGGGAAGCG
GACGGCCTGC GCAAGGTGAT CAGCAAGAAA AGCAGGGAAC AGCTGTCCGA TTACCGGTCC
CGGTTCGCGC GGGGATGCGC CGCCCGGGGA GTGTCCCCCG ACGTGGTGGA TAGAGTCTGG
GAGATGTTCA TCTCCTTTTC CGGCTATTCT TTCTGCAAAC CTCATTCGGC ATCCTACGCC
CTGGTCAGCT TCAAATCCGC CTACCTGAAG GCCCATTACC CGGCCGAATT CATGGCCGCC
GTACTGAGCA ACGGCGGCGG GTACTACAGC ACCTTCGCCT ACGTTTCCGA ATCGAGGCGG
ATGGGATTGA CGGTGGCCGG ACCCGACATC AACGAAAGCG CCTGGAATTA TCGCGGCGGG
GACCGGTGCG TCCGAATGGG CCTGCGGCAA CTCCAGAACA TTCGCAGAAG CACCCTGGAA
GACATTCTTG CCGAACGAGG AAAAAACGGA CCGTTCGCAT CCGTCGAAGA GCTTTTGCGG
CGGGTGGACA TCCCCCCCTC CGACGGGATG ATTCTCGCCA GGAGCGGCGC ACTGGATTCC
CTGTCGGGCG GCCTCAACCG TCCCCGGCTG CTCTGGTTCA TCGAGGCCTG GTTCAACGGC
GCCGGTGTGA AAGGAACGGC GGGGCACGGG CAGATTTCGG CCTTTCCCCG TCCGCGGGCA
CGGATCGTCG TGCCTCCCCT CCCCGGTTTT TCCCCACGGC AAACATGGCG GCACGAAATG
GAAACCCTGG GCTTCGTGCT GTCGGTGCAT CCGCTGGCCA TGGTCGAACC AATGGCGCGC
AAGCTCCCGC ACCGCGTCAC GAAGGCCGCG GACCTGCATC GGCACGTCGG CGAGCGGGTC
TGCACGGCGG GCTGGCCGAT CACTCGCAAG GAAGTACTGA CCAGGGAGGG CGAACCGATG
GAATTCGTTT CGTTCGAGGA CCGAACGGCC ATCTACGAGA CCGTTTTCTT TCCGTCGGCC
TTCCGGCGTT TCTGCCAGGA CATCGATATG AACAGGGGGT ACCTGATCCT GGGAAAGGTC
GAAAGCGAAT TCGACACGGT GAGCCTGGCC GTGAACCGGG TCGTCAAGCT GCCCCCGGTC
CTGGAGGATT GA
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| Protein sequence | MRETFVHLHV HSHYSMMRGV SSVTALCRTA SALGFEHLAL TDDKGFYGLI NFLDAARRFG
IHPIVGTTIG TGPDTAVVLA KTPRGYELLS ELTTRRHLDA DFSLLRDFPD GRRDLVVLTA
NPEIIKALHP RRECGVEVVP GPGDRRLLKM AHSLGVPPVA TNAVHFAHLE DYSLHRLVRA
IDLNLTLSNI PREEIVRPDQ WLQSAAQMER RLPHCPEALA NTLKLAGECH TKWDHFRTIF
PHYRDRREDH FALLLEKCRK GISWRYGRTS PAVEERLAEE LDLIGAKGYV DYFLVVADIV
GRRPIHCGRG SGAASLVSYL LGITHVDPLR HNLLFGRFLN PERKDLPDID VDFPWDERDD
LFEELRRHYG AERMATVANH VGFGARAAVR EVARVYGVPA AEIKEVTRRM SFWTEPGAMW
ERIGTHPKFR GFPLDPPWPE IIDLAGRLES LPRHLSMHCG GVIIAPDRIS RHVPVQRSAK
GARIIQWEKD QAEKAGLVKI DLLGNRSLAV IRDSLAAIRE NYGKDLEYAR LNPVDDPDTR
EQIRTGRTMG VFYVESPAMR LLQQKAGCGD FEHLVIHSSI IRPAANRYIR DYLDRLHGAP
YEPLHPSLAG LLAENYGILV YQEDVVQAAM ILAGFSWGEA DGLRKVISKK SREQLSDYRS
RFARGCAARG VSPDVVDRVW EMFISFSGYS FCKPHSASYA LVSFKSAYLK AHYPAEFMAA
VLSNGGGYYS TFAYVSESRR MGLTVAGPDI NESAWNYRGG DRCVRMGLRQ LQNIRRSTLE
DILAERGKNG PFASVEELLR RVDIPPSDGM ILARSGALDS LSGGLNRPRL LWFIEAWFNG
AGVKGTAGHG QISAFPRPRA RIVVPPLPGF SPRQTWRHEM ETLGFVLSVH PLAMVEPMAR
KLPHRVTKAA DLHRHVGERV CTAGWPITRK EVLTREGEPM EFVSFEDRTA IYETVFFPSA
FRRFCQDIDM NRGYLILGKV ESEFDTVSLA VNRVVKLPPV LED
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