Gene Sfum_0908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0908 
Symbol 
ID4460305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1119937 
End bp1121058 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content58% 
IMG OID639701671 
Producthypothetical protein 
Protein accessionYP_845039 
Protein GI116748352 
COG category[S] Function unknown 
COG ID[COG3146] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.562681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCGG TTCATTTCGA AACGTTCGCA AGTGCGCGCG AGGTCGGCGG TGAAGTCTGG 
AACGGACTTG CCGCAGACGC CAATCCGATG ATGGAATGGG AGTACTTCTG CGCCCTGGAG
GAGTCCGGAT CGGTCGGTCC CGAGAAGGGT TACTTTCCCG CTCACCTCGT GCTCTATTGC
GATGATCGCC CGGTGGCCCT CGCGCCGCTG TACCGGAGAG ACCGTGCATG GGTTGAATTC
GGCGACGGCG GATTGATCGA ATTCCTGAGC CAGTTGAGCG GCCTGCCGTA TCAGCGGGGA
CTGGTCGGTG CCGTTCCTTT TACGCCGGTC CCCGGCTACC GTTTCCTTTG TCTTGGAGAT
CGCAGTCCGC TGGAGATCTT CGCCCTCATG CTCGATGAAA TCGACCGCCT GTGCGAGGCG
CAGGACCTCT CAACCAGCCG AATCTATTTC GTGGCATCCC GCGGGCCCGC CTTGCGTCAT
CTTCTCCTGC AGCGCGGCTA CACGAACCTC ACGGCAGGCT ACACGCTGTG GTTCAACCGG
GGCTATCTCA GTTTCAACGA TTACCTGGGA TCGTTCAAAT CGAGCAGAAG GACGAAAATC
AAACGGGAAA TCCGAGCCAT CCAAGACGCG GGGATTTCGT TCGAAATGCT GGACGGCAGG
GAAGCTTCGC AGTCCGATTT CCTCGAGATG CACAGACTGT ATGAAAAAAC CTGGCACAAG
CACATGGGAA ACGGTCTGAG GCCTTTTCTC AATGGATCCT TCTTCAGGAT GCTGGGTGAT
TCGTTCAGGC ACAGGGTGAG CTTTTCCGTG GCGATGCGGG GACGCCGGCG CCTGGCGATG
GCGCTTTTCT ACCACAAGGC GGCGGAATTG TACGGCCGTT ACTGGGGATG CACCGAGGAG
ATTCCCTTCC TGCACTTCTC CAGCTGTTAC TACTTTCCCA TCCGGCACGC CATCGATCGA
GGTTTCCAGA TGATGGATCC GGGTTTCGGC GGTGAACACA AGCTTATCCG AGGCTATGAA
ACGGTTCCCG TTCACCACTT CATAAAATTC CACGGAGAAC GAAAGCGACG CGTTGCCGCC
GCGATATTGA ACCGGTTGCA GCAGGTGCCC GGAAAAGGCT GA
 
Protein sequence
MMAVHFETFA SAREVGGEVW NGLAADANPM MEWEYFCALE ESGSVGPEKG YFPAHLVLYC 
DDRPVALAPL YRRDRAWVEF GDGGLIEFLS QLSGLPYQRG LVGAVPFTPV PGYRFLCLGD
RSPLEIFALM LDEIDRLCEA QDLSTSRIYF VASRGPALRH LLLQRGYTNL TAGYTLWFNR
GYLSFNDYLG SFKSSRRTKI KREIRAIQDA GISFEMLDGR EASQSDFLEM HRLYEKTWHK
HMGNGLRPFL NGSFFRMLGD SFRHRVSFSV AMRGRRRLAM ALFYHKAAEL YGRYWGCTEE
IPFLHFSSCY YFPIRHAIDR GFQMMDPGFG GEHKLIRGYE TVPVHHFIKF HGERKRRVAA
AILNRLQQVP GKG