Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0896 |
Symbol | |
ID | 4460328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 1103444 |
End bp | 1104331 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639701659 |
Product | LysR family transcriptional regulator |
Protein accession | YP_845027 |
Protein GI | 116748340 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.204372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATGC AGCGGCTGCA AACCTTCCGG ACTGTTGCGG CTCTGATGAA CTTCAACCAG GCCGCCAATA TCCTGAATTG CGCTCAATCA ACCGTTTCGG CCCAGATCAA GGCCCTTGAA AATGAAATCG GAACGATGCT CTTCAAAAGG ATCGGTAAAT CCGTCCAGCT TACGGAAGCC GGAGCCAAGA TGCTCATTTA CGCCGACAAG CTTTTAGCGA TAAAGGATGA AGCGTTGGCC GAAGTCAGGG GCAACAAACC GGGCTCCGGC ATGCTGACCT TGAGGATGCC TCAGACAATG GCCACCTATT ACCTCCCTCA TATCCTCCGT TCTTATCAGC CGCGCTTTCC GGGCATAAGG CTGGATATTA CCAGTTGCGC CCTGCATTCG CTGGAAAACG AACTGAGGAT CGCTACGGTG GACCTTGCCT TCCTCTTCGC CGAGAGCATC GGAGCGAAAA ACCTGGAATC CGAATTCCTG GGGAGCGACC CCCTGTTCTT TGTCACATAT CCCGGCCATC CACTATCAAC CCGCAGACGA GTCGATTTCA AAAACCTTGA AGGAGAAGTT CTCCTTCTAC CCAAAAGCGA CTGCGGATAT CGCATGGTGC TCGAACAGAC GCTGACGGCG GAAAAGGTTA CCCCCGCAAC CATTATCGAG ATGAACAGCA TCGAGGCAAT CAAACAGGCA ATCATGGCGG GGCTGGGAGT GACCGTAATC CCGGAGATTG CCGTTCGCTC TGAAATAAAA GAAGGGCGAA TTGCCAGGAT CGCCTGGGTG GATGATCTGG AAACCGGGAT TCTCATGATC CGATATAGGG ACAAATGGTG TCCGCCGCCC CTCGATGCGT TTATGGATAT GGTGAGGGGT TTTTTCAGGG CGAGATAG
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Protein sequence | MEMQRLQTFR TVAALMNFNQ AANILNCAQS TVSAQIKALE NEIGTMLFKR IGKSVQLTEA GAKMLIYADK LLAIKDEALA EVRGNKPGSG MLTLRMPQTM ATYYLPHILR SYQPRFPGIR LDITSCALHS LENELRIATV DLAFLFAESI GAKNLESEFL GSDPLFFVTY PGHPLSTRRR VDFKNLEGEV LLLPKSDCGY RMVLEQTLTA EKVTPATIIE MNSIEAIKQA IMAGLGVTVI PEIAVRSEIK EGRIARIAWV DDLETGILMI RYRDKWCPPP LDAFMDMVRG FFRAR
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