Gene Sfum_0866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0866 
Symbol 
ID4460728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1070747 
End bp1071667 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content60% 
IMG OID639701629 
Producthypothetical protein 
Protein accessionYP_844998 
Protein GI116748311 
COG category[S] Function unknown 
COG ID[COG2324] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACT TCTTTCGTCT CCTCCTCGGC ACCATGGTGC TGCGGCCCTA TGTCTTCGTT 
TTTCTGGCCG CCTACCTCGT GGCGGCGTCG GCTCATCTCG GCTGGAAAAA GGCGCTGGCA
TACGTGCCGC TGGGTTACTG CATCGCCTGG ATTTCCGAGT TCTCGTCCAT TCACTGGGGA
TTCCCCTACG GGGATTACTA TTACATCCCC GCCACCATCG ACCGGGAATT GTGGGTCTTC
GGCGTTCCGT TCATGGACTC GCTCTCCTAC GTATTCCTTT CCTATTGCAG CTATTCGACG
GCTATCTTTT TGCTGAGTCC CGTGTATATC GGAAAGGGCA CGGTGCTGAT CCTCGAGACC
CGCCGTTTAA GGCGCTCGTG GCAGACCGTG GTGCTCGGGG CCTTTCTCTT CGTCCTGCTG
GACATCATCA TCGATCCGGT GGCCCTCCAG GGGTACCGCT GGTTCCTCGG ACAAATCTAC
GGCTACCGGC ATCAGGGACT CTACTTCGGG ATACCCATGA GCAACTTCGG GGGCTGGCTG
CTGGTGGGAC TGGTCATGAT GGCCGCGCTG AGCCGGCTCG ATCGCATATC GGCACTCGAA
TCGTCGGCCG CGCCCTTCCC TCTCAATGCA ATCCCGGGCG TCCGCCTTTT CGGGCCCTTG
CTCTACTGTT CCGTCCTTGC GTTCAACCTG GCCGTCACGT TCTGGATCGG AGAACACCTG
CTCGGCCTCG TGGGCTGTCT CATCCTTTTC TTCAGCGGCC TGACCGCCGC CTTCTGGACG
CGCTACAAGA TCGAGAACCT TTCGGCGGGA GCCGTCTACG CGCATTTCCG GGATTTTCCC
TCACCGTCCG AGTATCGTGT GGTCGAGCCG TTCCTCCAGG CGGCAGTCCC CGACGAATCG
ATTCAGGTCG GCGGCGGGTA G
 
Protein sequence
MSDFFRLLLG TMVLRPYVFV FLAAYLVAAS AHLGWKKALA YVPLGYCIAW ISEFSSIHWG 
FPYGDYYYIP ATIDRELWVF GVPFMDSLSY VFLSYCSYST AIFLLSPVYI GKGTVLILET
RRLRRSWQTV VLGAFLFVLL DIIIDPVALQ GYRWFLGQIY GYRHQGLYFG IPMSNFGGWL
LVGLVMMAAL SRLDRISALE SSAAPFPLNA IPGVRLFGPL LYCSVLAFNL AVTFWIGEHL
LGLVGCLILF FSGLTAAFWT RYKIENLSAG AVYAHFRDFP SPSEYRVVEP FLQAAVPDES
IQVGGG