| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0806 |
|---|
| Symbol | |
|---|
| ID | 4460166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 996534 |
|---|
| End bp | 996947 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639701568 |
|---|
| Product | UspA domain-containing protein |
|---|
| Protein accession | YP_844939 |
|---|
| Protein GI | 116748252 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0671262 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.592673 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTGC TGGTGGCGAC GGACGGATCG GAAAGAGCAA TGAAGGCCGT GCGGAAATCA
CTCGAAATGG CCGAAAAGGA AGGCGCCGAC GTCACTTTGC TGTCGGTCGG GTATTTCCTC
AGGAGTGAGG TTGAGGATGT GCCTCTCAAT GTCCAGGAAG CTCTGGATGC CGATTCCCGC
ACTGCTCTCG AGAAGGCCAA AGCCCTTTTT GATGAAAAGG GAATCAAGGT GACGACCGTC
ATGGAAAAGG GGCTTGTCCC GGCCAATGTC ATTCTGGAGG TGGCGAGGGA AGGCAGGTTC
GATCACATTC TGCTGGGCAG CACGGGCAAG ACGGGTCTCG AGAAATACCT CATCGGAACG
ACCGCGACCA AGGTCGTCGC CAATGCCCCC TGCACGGTGA CCGTGCTCAG GTAG
|
|---|
| Protein sequence | MKVLVATDGS ERAMKAVRKS LEMAEKEGAD VTLLSVGYFL RSEVEDVPLN VQEALDADSR
TALEKAKALF DEKGIKVTTV MEKGLVPANV ILEVAREGRF DHILLGSTGK TGLEKYLIGT
TATKVVANAP CTVTVLR
|
|---|
| |