Gene Sfum_0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0788 
Symbol 
ID4460441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp972935 
End bp973336 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content58% 
IMG OID639701550 
Productputative transposase 
Protein accessionYP_844921 
Protein GI116748234 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.70701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCTTA GAGCCAGGAT CATCCTCATG GCCGCAGAAG GGGGCAAGAC TAAAGACATC 
GCCCAAGCCC TCACGCTCCT AAACGCCACT GTGAGCAAAT GGCGAACCCG ATTCACTCAG
AGAAGAATCG AGGGGTTGCG GGACGAAGCC CAGAGCGGAA AGCCCCCGAC CTACGACTCG
GAAACGGAGA AGAGAGTGCT TGCTCTTCTC GATGAACTTC CCCCCCGAGG CTATGCCACC
TGGAACGGAC GATTGGTATC CGGGGCTTTG GGCGACGTCT CCGACGATCA GGTCTGGAGA
ATCCTTAGAA GGCACGGGAT CTGCCTTGCG AGAAGAAAGA GTGGGGGCAT CTCCAAGGAC
CCGAACTTCT CGGCCAAGGC CGCAGACGTG GTTGCGCTCT AG
 
Protein sequence
MVLRARIILM AAEGGKTKDI AQALTLLNAT VSKWRTRFTQ RRIEGLRDEA QSGKPPTYDS 
ETEKRVLALL DELPPRGYAT WNGRLVSGAL GDVSDDQVWR ILRRHGICLA RRKSGGISKD
PNFSAKAADV VAL