| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0766 |
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| Symbol | |
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| ID | 4461702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 938590 |
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| End bp | 940380 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639701528 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_844899 |
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| Protein GI | 116748212 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGAATG CGATCATGAA GAATCACGGC CCGCACCGGC TCGATCTCGG CGAGTTGCTC
GAAGATCTCG TCGCCGACGG AATGGTTGCG CAGGCGGATG CCGCGAGGAT TCCGCGGCTG
GCCCCGACGA AGGACAAAGC CGAAGTCCAT CCTTTAAAAA TCATAGCCGA TCGCAGGCTG
AACCGCGCAT CGCCGCCCCA CGAACTGCTC ACCTTGGAAA CACTCACCGC GTGGCTGGCC
AAGACGGCGG ACCTCCCGTA CCAGCGCATC GACCCGCTCA AAATCGACGT CACGAGCGTC
ACCGGCATCA TGTCCTACGC TTACGCCTCC CGGTTCAAAA TTCTCCCCAT CGAGGTCACG
GACGAGCAGG TGGTGATCGC GACTTCGGAG CCGTTCGTCA CCGAGTGGGA AGAGGAGTTG
CACCGGATCC TGCATCGCAA GATCGTCAAG GTGGTCGCCA ATCCGGTTGA AGTCAGCCGA
TACCTCGTGG AGTTTTACGC CCTCAACGAA TCGGTGAAGC GGGCTTTCGG AATGGCCGAC
CAGACGCGGC TGGCCGGGAC GATGAACCTG GAGCAGCTCC TGGAACTGGG ACGCGCCGGG
AAGCTGGACG CCAACGACCG GTACGTGGTG AACATCGTGG ACTGGCTCCT GCAATACGCA
TACGACCAGC GCGCCAGCGA CATACACCTG GAACCCCGCC GGGACAACAG CGACATCAGG
TTTCGCATCG ATGGCGTGCT CCACCTGGTG TATCAGTTGC CGACCGTGGT CATGAGCGCG
GTGACGAGCC GCATCAAGGT GCTGGGGAGG ATGGACCTGG CGGAGAAGCG GAGGCCGCAG
GACGGCCGTC TGAAGACGAA ATCGCCGGCC GGCGGAGAAA TCGAGCTCCG GTTGTCCACC
ATGCCCACCG TGTTCGGTGA AAAGCTGGTG ATGCGCATCT TCGATCCCGA GGTTACGATC
CGGAGCTTCG AGGACCTCGG GTTGAGCAAG AGCGAAATCA GCGCCTGGAA AGGGATGGTC
AGCCGGCCCA ACGGAATCAT CCTGGTCACG GGGCCGACGG GATCGGGCAA GACCACGACC
CTGTATTCCA CACTGAAACA CCTGGCGCGC CCCGAGGTGA ACGTGTGCAC TCTCGAGGAG
CCCATTGAAA TGGTTGAGCC CCGGTTCAAC CAGATGCAGG TCCATCACGG CATCGGGCTG
GACTTTGCAA ACGGTTTGCG AACGTTGCTG CGCCAGGATC CGGACATCAT CATGGTGGGC
GAGATCCGCG ATCTCGAAAC CGCTGAAATG GCCGTCCAGG CAGCCCTTAC GGGCCACCTG
GTGTTTTCGA CGCTCCATAC CAACGACGCG GTTTCCGCCA TCATCCGGTT GATGGACATC
GGCGTTCCGC ACTACCTCAT TCGCGCCACG GTGCTCGGCG TGGTGGCGCA GCGCCTGGTG
CGCACGCTCT GCGCGAGCTG CAAGCAGGAA GGCGCCGTCG ACGAGGATCT CTGGCAGGCG
CTCATCAGTC CCTGGAAGAT GACCCGCTCG AACGCTTTCT ACCAGCCGGC GGGGTGCCTG
GAATGCCGCG AAACCGGCTA CCGCGGGCGT ATGGGCATCT ACGAGATTTT CACCATGAGT
CCAGCCCTGC TGCAGCTGAT CAAGCCGGAT GCGGACATCT CCCAGATTCG AGCCCAGGCG
ATCAAGGAGG GGATGTACCC CCTGGCCATC GCGGGCGCCA AGAAGGTTTG CGCCGGGCTG
ACGACCGTTG AGGAGGTGCT CAGGGTCGCC GGCGCAGGCA GCGAAATCTG A
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| Protein sequence | MTNAIMKNHG PHRLDLGELL EDLVADGMVA QADAARIPRL APTKDKAEVH PLKIIADRRL
NRASPPHELL TLETLTAWLA KTADLPYQRI DPLKIDVTSV TGIMSYAYAS RFKILPIEVT
DEQVVIATSE PFVTEWEEEL HRILHRKIVK VVANPVEVSR YLVEFYALNE SVKRAFGMAD
QTRLAGTMNL EQLLELGRAG KLDANDRYVV NIVDWLLQYA YDQRASDIHL EPRRDNSDIR
FRIDGVLHLV YQLPTVVMSA VTSRIKVLGR MDLAEKRRPQ DGRLKTKSPA GGEIELRLST
MPTVFGEKLV MRIFDPEVTI RSFEDLGLSK SEISAWKGMV SRPNGIILVT GPTGSGKTTT
LYSTLKHLAR PEVNVCTLEE PIEMVEPRFN QMQVHHGIGL DFANGLRTLL RQDPDIIMVG
EIRDLETAEM AVQAALTGHL VFSTLHTNDA VSAIIRLMDI GVPHYLIRAT VLGVVAQRLV
RTLCASCKQE GAVDEDLWQA LISPWKMTRS NAFYQPAGCL ECRETGYRGR MGIYEIFTMS
PALLQLIKPD ADISQIRAQA IKEGMYPLAI AGAKKVCAGL TTVEEVLRVA GAGSEI
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