| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0712 |
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| Symbol | |
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| ID | 4461274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 866805 |
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| End bp | 867785 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639701474 |
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| Product | D-alanine--D-alanine ligase domain-containing protein |
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| Protein accession | YP_844845 |
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| Protein GI | 116748158 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.396337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTGG GTATTGCCTA CGATCTGAGG CAGGAATACC TTGCGGAGGG TTATAGCGAT
GAAGAAACCG CCGAATTCGA CCGCCCGGAG ACCATCGATG CCATCGAATC GGCCCTGCGC
GACCTGAAAT TCGAAACGGA CCGCATAGGG CACGTTCGGA ACCTTGTGCG AAGGCTGGCT
GTGGGCGAGC GATGGGATTT GGTGTTCAAC ATTGCCGAAG GACTGGCGGG TTTCGGACGG
GAAGCGGCGA TCCCCGCGCT GCTCGATGCC TACGGGATTC CCTACACCTT CTCGGACCCT
TTGGTTCTTT CCCTGTCGCT CCACAAGGGC ATGGCCAAGA ACGTGCTCCG CAACATGGGC
ATCCCGACGG CCGATTTCGT CGTCATCCAG GACGTGTCGG AAACGGAAGC GATCGGGATC
CCCTTTCCGG TATTCGCAAA ACCGGTGGCG GAAGGAACCG GAAAGGGGAT CGACGCTGCA
TCCCGGATAG GCACTCAAGA GGAACTGGTT GCGAAATGCC GTCAACTCCT GGAAGTCTAC
AGGCAGCCCG TCCTCATCGA AAAGTTTCTG CCCGGCAGGG AGTTTACCGT CGGACTCGTT
GGGACGGGGG CGAAGACCGA GGTCGTCGGC GTGATGGAGG TGATCCTCAA GGACGGGGCG
GAGCGGGACG CCTATTCCTA CAGCAACAAG GAACACTACG AACGGAGGGT GGAATACCGT
CTGGCGGAAG GCTCCATTGC CAGGCTTGCG GCAAGAATCT CCGTCGAGGC GTGGAGGAAG
CTCGGCTGTC GAGACGGCGG CCGCATCGAT CTGCGTTGCG ATGAAAGAAA CGTGCCGAGC
TTCGTGGAAC TCAATCCGCT TGCGGGACTG CATCCCGTGC ACTCGGATCT GCCCATTCTC
TCGAGGCTCG CCGGTATGTC CTATGTTGAA CTGATCGGCA GGATCATGGC GTCCGCCATG
GAGCGCGTCG ATTCCGGATG A
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| Protein sequence | MKVGIAYDLR QEYLAEGYSD EETAEFDRPE TIDAIESALR DLKFETDRIG HVRNLVRRLA
VGERWDLVFN IAEGLAGFGR EAAIPALLDA YGIPYTFSDP LVLSLSLHKG MAKNVLRNMG
IPTADFVVIQ DVSETEAIGI PFPVFAKPVA EGTGKGIDAA SRIGTQEELV AKCRQLLEVY
RQPVLIEKFL PGREFTVGLV GTGAKTEVVG VMEVILKDGA ERDAYSYSNK EHYERRVEYR
LAEGSIARLA ARISVEAWRK LGCRDGGRID LRCDERNVPS FVELNPLAGL HPVHSDLPIL
SRLAGMSYVE LIGRIMASAM ERVDSG
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