Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0708 |
Symbol | |
ID | 4461270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 862460 |
End bp | 864508 |
Gene Length | 2049 bp |
Protein Length | 682 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639701470 |
Product | CoA-binding domain-containing protein |
Protein accession | YP_844841 |
Protein GI | 116748154 |
COG category | [C] Energy production and conversion |
COG ID | [COG1042] Acyl-CoA synthetase (NDP forming) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACAAGT TCTTCGAAGC GCGGAACGTG GTGGTCGTCG GTGTCTCGAA CGCTCCCGGA AATCTTGGCA GGCTGATGGC GGCAAATCTC ATGGAGTTCC ATTTTCAGGG GAACATCTTC CTGGTCGGTC CCAAAGGAGG TTCTTTCCTC GGGCACAAAA TCCATGCGCG CATCACTGAC GTTGACGATG CGATAGACCT TGCGACAATT CTCGTGCCGG CTCCCGCGGT GCCGGAGGTT CTGAGGCAGT GCGGCGAAAA AGGAATCCCA AGGGTGATCG TGCAGTCGGC CGGATTCAGA GAACTGGGAG AGGAGCGATT GGAGCTGGAA GGCAAAGTCC GGGACCTGCT GGAGCATTAC CGGATGAGGA TGATCGGCCC CAACTGCCTG GGGGTGATCA ACCGGCGGAC GGGGCTGGCC GTTCCCTTCT TCCCCTTGGC GGCCAATGTC GGAGCCGGCC CGATCTCCAT TATCTCGCAA AGTGGCGGGG TGGGGGCCAT GATGGTCAAC CTGCTGGAAG CGGAAAACCT CGGTCTGAGC AGGTTTGCAA GCGTGGGAAA CAAGCTCGAC GTCTCTGAGA ACGACCTGCT TGAGTATTTC GCGCGGGACC CGGAAACCGA GATGATCCTG TGCTATCTGG AGGGTATCGC CGATGGCCGT AAGCTCATGC GGATCACGCG TGAAACGCCC AAGCCGGTTA TCGTTCACAA GTCGAACACG GGTAAGTGCG GGGCGGCCAT AGCCCGCTCG CATTCGGCTT CGTTGTCCAG CGACGATCGC GTTGTGGACG CGGCGTTCAG GCAGAGTGGA ATCATCCGCG TGCGGGAGCA GAGGGAGGCG GTGGAGGTGC TGAAGGCGTA CTCCCTGCCG CCGCTGGCCG GAAACCGGCT TGCCGTCATA TCGAGGTCCG GGGGGCACGC CGTGCTTGCC GCGGATGCGG CCGAGGAATA TGGTTTCGTG CTGCCGCCGT ACCCGGAGGA TTTCTTTCAA CTCATCAGGG AACAATCGAG GGCCAACGTC ATCTCTTTTC ACAACCCTCT GGACGTGGGG GACGTATACA ATATCGCCCT GTACAGAACC CTGATCGAAA AGACCCTGGA GCGGGAGGAT ATTGATGGAA TGATTCATGT TCACAACTAC CAGGGGAACT TGAATGTCGA GGAATCCAGG GAACTCATAT CATCGCTCGG GGACCTGATC AGGAAGTATC GGAAGCCGCT GGCCTCCTGT GTTTTCACCA CGCGGGACGA GTTCGAGGCG ATCAAGCATG CCGTCGACTT TCCGATTTTC AATGATCCGC GCGAAGCCGC AAGGGCACTG AAGCAGGTTC GCGACCACCG GAGCCTGCAA ACGATTCCCC TCGCCGGCGT TTGTCCTTCC GATATCGATC CGTCCCGCGC TCGAAAGACC CTGGAAGGGC TGAACCCCGG ACCGATCCCC GCCGAAAGAC TGGCGCCGCT TCTGTCCGCG TACCGGATTC CCTGCGTCGA ATGGGAATTT GCGGACAGCC TGGATTCCGT GACCTCGGCG GCGCATCGCC TGGGGTTCCC GGTGGCGCTC AAGACCGCCG AACCTGACGT GGTGCACAAG AGCGACGTTG GAGGGGTGAG GCTCAACCTC GCAGACGAAA AAGGGCTTGC CGAAGCCTAC GGGGAAATCA GCCGGTTGGG GCCGGCCGTG CTCGTTCAGA AGATGTCCGG TCCGGGCCTG GAATGGCTGG TGGGAGGGCG CCGGGATGAG AATTTCGGCC CGGTCGTGGT GGCGGGACTC GGCGGCGTCT ACGTGGAAGT CTTCAAGGAG ACCGGAATCC GCGTTGCGCC GATTGAACGC GAAGAGGCCT CCCGGTTGGT GGACGAATGC CGGGGAAGCA TGCTCCTGGC GGGCTTGCGC GGGGACAAAG CCTTGGATCG ACAGGCGCTC CTCGATGTGA TCGTCAGGGT TTCGTGGTTG TTGCATGATT TTCCGCAAAT CCGGGAACTG GATCTGAATC CGGTCCGAGT ATACGAGCAA GGGTGCCTGG CCCTGGATTG GCGCGCGACC GTCGAGTGA
|
Protein sequence | MDKFFEARNV VVVGVSNAPG NLGRLMAANL MEFHFQGNIF LVGPKGGSFL GHKIHARITD VDDAIDLATI LVPAPAVPEV LRQCGEKGIP RVIVQSAGFR ELGEERLELE GKVRDLLEHY RMRMIGPNCL GVINRRTGLA VPFFPLAANV GAGPISIISQ SGGVGAMMVN LLEAENLGLS RFASVGNKLD VSENDLLEYF ARDPETEMIL CYLEGIADGR KLMRITRETP KPVIVHKSNT GKCGAAIARS HSASLSSDDR VVDAAFRQSG IIRVREQREA VEVLKAYSLP PLAGNRLAVI SRSGGHAVLA ADAAEEYGFV LPPYPEDFFQ LIREQSRANV ISFHNPLDVG DVYNIALYRT LIEKTLERED IDGMIHVHNY QGNLNVEESR ELISSLGDLI RKYRKPLASC VFTTRDEFEA IKHAVDFPIF NDPREAARAL KQVRDHRSLQ TIPLAGVCPS DIDPSRARKT LEGLNPGPIP AERLAPLLSA YRIPCVEWEF ADSLDSVTSA AHRLGFPVAL KTAEPDVVHK SDVGGVRLNL ADEKGLAEAY GEISRLGPAV LVQKMSGPGL EWLVGGRRDE NFGPVVVAGL GGVYVEVFKE TGIRVAPIER EEASRLVDEC RGSMLLAGLR GDKALDRQAL LDVIVRVSWL LHDFPQIREL DLNPVRVYEQ GCLALDWRAT VE
|
| |