Gene Sfum_0702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0702 
Symbol 
ID4461264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp855533 
End bp856291 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content62% 
IMG OID639701464 
ProductABC transporter related 
Protein accessionYP_844835 
Protein GI116748148 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1117] ABC-type phosphate transport system, ATPase component 
TIGRFAM ID[TIGR00972] phosphate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTAGGCC CCAAGATTCG CATCGATCAG GTGAGCTACT CCTACGGGAA TGAGCAGGCC 
CTGCGCGACA TCAGCCTGGA CATTCCGGCC AACCGGATCA CCGTTTTCTT CGGTCCCGCC
GGCGGAGGCA AGACGACGCT GCTGCGCCTC GTCAATCGGC TCAACGACCT GGTGGAGGAC
ACCCGCATGT CGGGCCGCAT CCTCATCGAC GGCGATGACA TCTACTCCCC CGGCGTCAAC
GTTCCCAATC TGCGCCGAAG GGTGGGAATG GTTTTTGCCC TGCCGCTGCC CCTTCCCGGC
ACCATTCGAG AAAACATCGT CTACGGTCCC AAGCTCGCCG GCATACACGA CCGCGGCCGA
CTCGAGGAGA TCATCGAACG CAGCCTCATC CAGGCCGCCC TCTGGGACGA GGTGAACACG
CGCCTCGACA GTCCCGCCGG CGCCCTGTCC GGAGGCCAGC AGCAACGGTT GTGCATCGCC
CGCAGTCTGG CTCTCGAGCC GGAAGTCCTG CTCCTGGATG AGCCCACGTC CGGCCTGGAT
CCGATTTCCA CCCGGAAGGT CGAGGAGTCC CTCTTCGAGC TCCGGGACCT GTACACGATC
GTGATCGTTC CCCACAGCAT TCAGCAGGCG GCCCGCGTCG CGGATTACGC CGCATTCTTC
CTTATGGGTG AATTGATCGA ATTTCAACCG GGTTCCGAAA TCTTTACGAC AACTCGTGAC
AAGCGGACTG AAGACTACCT GACCGGCCGC TTCGGATAG
 
Protein sequence
MVGPKIRIDQ VSYSYGNEQA LRDISLDIPA NRITVFFGPA GGGKTTLLRL VNRLNDLVED 
TRMSGRILID GDDIYSPGVN VPNLRRRVGM VFALPLPLPG TIRENIVYGP KLAGIHDRGR
LEEIIERSLI QAALWDEVNT RLDSPAGALS GGQQQRLCIA RSLALEPEVL LLDEPTSGLD
PISTRKVEES LFELRDLYTI VIVPHSIQQA ARVADYAAFF LMGELIEFQP GSEIFTTTRD
KRTEDYLTGR FG