| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0688 |
|---|
| Symbol | |
|---|
| ID | 4460191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 836546 |
|---|
| End bp | 837985 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639701446 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_844822 |
|---|
| Protein GI | 116748135 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.96208 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.146294 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTTG CCCGGCAAGC TTCACGGGTT GCGTTTCGAG AAGAGAAGTT CCTGATCGCC
TTTTTCCGGA TGATTCAGGT CATCAGGCTC TACGAGGACA ACAACCAGGT TGTGAGAAGG
GGCCTCGCGC TCCTGCTCGC ATCCGCCGAA GGCGTCATGA CCGAGGAAGG GCTGACGATC
ATTTTCTCCG ATGGGCAGCT CTTCGTGCAG GGGACCAGGG TTCGATACCA CCACGGGACG
GGTCTCTATT TTCAAGGACT GATTGAGTCC TTCGCCCGGA AGGGTCCTGT GGGATTCGTG
TTTCACAGTC ACATGAAAAA GGCGCCCGCA ACCGAAATCC TTTCCTTCCA TCGGCTCCTG
GTCGAATCGC TCGGGGACAA CAGGGATTGG GACTGGCTGG TCCGGCGCGT AAGGGATGAG
AAGAGAATCG GCTGGGTGGA TGTCCTCGAT GCGGTCAAGA CCGATGAACC CGGCCAACGA
AGCCGCGTCA AGGAAAGAGT TCGGGAAACC TACCTGCGGT CCAGAGCCGC CGTCTGCGAA
ATCACCAGGA AATTGTCCAG GGGAGCGAGT GTCGGGGTGT GGAAGGCGCA ACGCATTGTG
CAGAATATGG TCGACCTGGT CCAGGAAGAT GAGGCTCTGT TCATGGGCTT GAGCACCATC
AAGGATTACG ACGACTATAC TTACGGACAC TCCGTCAATG TGGCCGTGCT CTCCCTATGT
CTGGGCAACC GCATCGGGTT GTCCAGGAGC TCCCAGGTTC ACCTGGGAAT ATGCGGCCTT
TTCCATGACC TGGGAAAGGT GGAGATCGCC CCGGAAATCG TCAAGAAACC GGGCAAGCTC
AGTGAGGTTG AACGGGCGGA AATCGAAAAG CATCCCCTGT GGAGTGCCCG GCAGATTCTC
AACCTGCATG CCTCTCACGA TCTGAAATCG AGGATCACCC TGGCGCCGCT CGAACACCAC
CTGAATCACA ACCTTTCCGG TTATCCGAAG ATGCCTTCGA AAGAAAGGGT GAGCCTTTTC
GGCCGAATTC TGCACATCGC GGATTTCTTC GATGCGGTGA CGTCCCCCCG CGCGTATCGC
AAGTATGCCT ACAGTCCCGA CGAGGCGGTC AGAATGATGG CGGAAAAAGC GGGGGAGGAG
TTCGATCCCA TTCTGCTCAA GGTGTTCGCC CGCATGCTCG GCGTATATCC CATCGGCACC
CTCCTCCATC TCGACACGGG GGACGTGGGG ATCGTCTGTG ACTATCCCAA CGGGCGTGAC
AGGACGCTTC CTCGTATCGT CGTCGTCAGG AAAAACGACC AGGGCGAATT CGTTGGAGGA
GAAATCATCG ATCTCGACGA GAAGAACTCA AGAACAGGCG AATTGGTCAG GAATATCCTC
AAAAGCTCTC ATCCGGTCGC CTTCGGCATC CAGCCGGTGC ACTTTCTCCT CGAAAGGTGA
|
|---|
| Protein sequence | MTLARQASRV AFREEKFLIA FFRMIQVIRL YEDNNQVVRR GLALLLASAE GVMTEEGLTI
IFSDGQLFVQ GTRVRYHHGT GLYFQGLIES FARKGPVGFV FHSHMKKAPA TEILSFHRLL
VESLGDNRDW DWLVRRVRDE KRIGWVDVLD AVKTDEPGQR SRVKERVRET YLRSRAAVCE
ITRKLSRGAS VGVWKAQRIV QNMVDLVQED EALFMGLSTI KDYDDYTYGH SVNVAVLSLC
LGNRIGLSRS SQVHLGICGL FHDLGKVEIA PEIVKKPGKL SEVERAEIEK HPLWSARQIL
NLHASHDLKS RITLAPLEHH LNHNLSGYPK MPSKERVSLF GRILHIADFF DAVTSPRAYR
KYAYSPDEAV RMMAEKAGEE FDPILLKVFA RMLGVYPIGT LLHLDTGDVG IVCDYPNGRD
RTLPRIVVVR KNDQGEFVGG EIIDLDEKNS RTGELVRNIL KSSHPVAFGI QPVHFLLER
|
|---|
| |