Gene Sfum_0649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0649 
Symbol 
ID4460410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp778809 
End bp781490 
Gene Length2682 bp 
Protein Length893 aa 
Translation table11 
GC content59% 
IMG OID639701405 
Productpyruvate, water dikinase 
Protein accessionYP_844783 
Protein GI116748096 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase 
TIGRFAM ID[TIGR01418] phosphoenolpyruvate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGTC TCTTTGGATT TTTGAGAAAA CTGAAGTTCG GCGGGAAAGA TAAGGGAGCG 
CCACGTCCTT CGGACGTGGA AGCGCTGCGG ACTGCGTTCA AGGATCGTTA TCACAGTTTC
AAGCTGCTGC TGGCCGCCAA CAACAAGGCA CTGGAGATCA TGTCGGAGAT GGAGTACGCC
CTGCGGGGAC ACCGTCCTTT CGGGATGTCC TTCATCCGCG CGAATTGCAC GGCGGTTTCC
GTGAATGTGT TCCGCATGGT CCAAAACCTC GACCAGCTTG CACCCGGAAA ATACAGGGAC
CTGTTCGGGC GGTTCAAGGA CATCCAGGAT TCCATCAACC AACTCCTGCA GACCAGGAAG
TCGTTTGCGG GGGACCGGTA CGTGATTCCC TTCGAATCGA TCGACAGGAA CATGGCCGAC
CTGGTCGGGG GCAAGATGGC TAATCTCGGG GAGATATTCA ACAATTTGAA CCTCAGAGTC
CCTCCCGGGT TCGCGATCAC CTCGGCAGCT CAGGAAAGAT TTTTTGAATC TAATGACTTA
CAGCCGGAAA TCGATCGCAT CCTGCAGTCC TCGGCGGTTG ACAAGCTCGA CGAGCTCTAT
GCGGTAAGCT CGGAGATTCA GCAGTTGATC ATACGGGCGG AAATGCCCGA AGACCTCGAA
CGGGCGATTC GCGCCGAATA CGAGGCGCTG GAACGGACGG CCGGGGCTGG GGTGAAGGTT
TCGATGCGCA GCAGTGCGCT CGGTGAAGAC GCTCTGGGGG CGTCCTTTGC GGGACAGTAT
CGGTCCGAGC TGAACGTGAG CTCCGAAAAC CTCATGGAGG CCTACAAGGA AATCGTTGCC
AGCAAGTACA GCCTCCAGGC GATCTCCTAC CGCGTGGAGC GCGGCATCCT TGCCGAAGAG
GTCGCCATGA GCGTCGGGTG CATGGTGATG ATCAACGGCA TCGCCGGCGG GGTGACCTAC
TCCTGCAACC CCATGAACAT CAGGGATCAC TCGATACACA TTCACTCGGT GTGGGGGCTG
CCCAAGTCGG TGGTGGACGG GAGCGTGACT TCCGACGAGT TCGTCGTTTC GAGGAGCGAG
CCGCCCACGA TCGTTCGAAA AGAGATTCAG CACAAGAGCC ACCAGTTCGT GTGCTATCCC
GATGAGGGGG TGTGCCGATT GGACGTGGTG GAGGAGAAGA GCGCCGAGCC GTCGATTGCC
GACGCCCAGG CCCTGGAGCT GGCGCGCATC GCGATGGTCC TGGAGGATCA CTACGGCTGT
GCGCAGGACA TCGAATGGGC CGTGGACAAG GACGGTTCCA TCACCCTGCT GCAGTGCAGA
CCGTTGAAAG TGAGTGAAGG CACGGCCGTT CGGGCCGAAG GGGCGGATGA GACGGTCTTC
GGCGAGGTGC TTCTGAGCTC GGGCGTCACG GCCAGTCAGG GGGTGGGATA CGGCCCGGTG
TATGTGGTCC GCAAGAACAG CGACACCCTT CTTTTCCCGA GGGGCAGCGT GCTGGTCACT
CAGCAGGCCT TGCCCAGGTG GGCCGCGCTG TTGGGACATG CCTCGGCGGT GATCACCGAG
CAGGGCAGCG CCGCGGGCCA CTTGGCCAAT GTCGCCCGGG AGTTCGGTGT GCCGGCAATC
TTCGGTGTTC CGGAGGCCAC GGAAAAGCTC GCAAACGGCG AGGCGGTGAC GGTGGACGCG
GACGCCTTGA GGGTGTACAA AGGGACGGTG GAAGCCTTGC TCGGCCGGGC CAAGCCCAGG
ACCGGCCTGA TGGTGGGAAG CCCGGTCTAC GAGATACTGC GCCAGGTCGA CAAGCACATC
GTGCCCCTGA ACCTCCTGGA TCCCGATTCG TCCGATTTCA AACCCAAGAA CTGCCGTACC
CTCCACGACA TCACCCGGTT CTGCCACGAA AAATCGGTCA AGGAGATGTT CAGCTTCGGA
AACGACCACC ATTTCTCGGA AAGAGCCAGT AAGCAGCTGG TGTGCGATGT TCCCATGCAA
TGGTGGATCA TCAACCTGGA TGACGGCTTC AGGGAGGATG TTCCGGGTAA GTTCGTTCAT
CTGGACAACA TCGTCTCCAT TCCCATGCTC GCTTTGTGGG AAGGGATCGT GGCCGTGCCG
TGGGAAGGTC CGCCGCCCGT GGATTCCAAG GGGTTTATGT CCATCCTTCT GGAAGCGAGC
GCCAATCCGG CTCTCGATCC GTCCATGCCG TCCCCTTACG TCAATCGCAA CTATTTCATG
CTCTCCAGGA ATTTCTGCAG CCTCAGCTCC AGGTTCGGGT TCCATTTCTG CACGATCGAG
GCGCTTGTCG GAGAACGGCC CCATGAAAAC TACATCAGCT TTCAGTTCAA GGGGGGGGCA
GCCGATTTTC AAAGACGGTT GCGCCGGGTT GTTTTCGTCT CGGGCATCCT GGACGAATAC
GGTTTTCGGG TGGAGGTAAA GGAAGACGCG GTTCTTGCCC GCATCGAGGG TTTCGATGAA
TCGTACATGA AACGCAAGCT CAAGATGCTC GGCTACCTGA TCATCCATAC GCGCCAACTG
GACATGATCA TGTCCAATGA CGCATCGTAC AATCACCATC GGGAGAAGAT ACTCAAGGAC
CTCTCGAGGG TCCTCGGTTC CCGGGATGAG ACGGCCGCGG TGGTCGACGG GCAACCGGGC
GAGAGTTCCG CCCGGGAGGA GGGGGAACCC CGGACTTCAT GA
 
Protein sequence
MAGLFGFLRK LKFGGKDKGA PRPSDVEALR TAFKDRYHSF KLLLAANNKA LEIMSEMEYA 
LRGHRPFGMS FIRANCTAVS VNVFRMVQNL DQLAPGKYRD LFGRFKDIQD SINQLLQTRK
SFAGDRYVIP FESIDRNMAD LVGGKMANLG EIFNNLNLRV PPGFAITSAA QERFFESNDL
QPEIDRILQS SAVDKLDELY AVSSEIQQLI IRAEMPEDLE RAIRAEYEAL ERTAGAGVKV
SMRSSALGED ALGASFAGQY RSELNVSSEN LMEAYKEIVA SKYSLQAISY RVERGILAEE
VAMSVGCMVM INGIAGGVTY SCNPMNIRDH SIHIHSVWGL PKSVVDGSVT SDEFVVSRSE
PPTIVRKEIQ HKSHQFVCYP DEGVCRLDVV EEKSAEPSIA DAQALELARI AMVLEDHYGC
AQDIEWAVDK DGSITLLQCR PLKVSEGTAV RAEGADETVF GEVLLSSGVT ASQGVGYGPV
YVVRKNSDTL LFPRGSVLVT QQALPRWAAL LGHASAVITE QGSAAGHLAN VAREFGVPAI
FGVPEATEKL ANGEAVTVDA DALRVYKGTV EALLGRAKPR TGLMVGSPVY EILRQVDKHI
VPLNLLDPDS SDFKPKNCRT LHDITRFCHE KSVKEMFSFG NDHHFSERAS KQLVCDVPMQ
WWIINLDDGF REDVPGKFVH LDNIVSIPML ALWEGIVAVP WEGPPPVDSK GFMSILLEAS
ANPALDPSMP SPYVNRNYFM LSRNFCSLSS RFGFHFCTIE ALVGERPHEN YISFQFKGGA
ADFQRRLRRV VFVSGILDEY GFRVEVKEDA VLARIEGFDE SYMKRKLKML GYLIIHTRQL
DMIMSNDASY NHHREKILKD LSRVLGSRDE TAAVVDGQPG ESSAREEGEP RTS