Gene Sfum_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0624 
Symbol 
ID4461686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp752681 
End bp753100 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content60% 
IMG OID639701380 
ProductUspA domain-containing protein 
Protein accessionYP_844758 
Protein GI116748071 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGGAA ACGTGCTGGT GGCCACTGAT GGTTCGGAAC GATCGGCCAA GGCGGTGGAG 
AGGGCTCTGG AGATTGCGGA GAAGGAAGGC GCGAAAGTGA CCCTGATGGC CGTGGCCTAT
TATGCGCGGG ACGACCTGGA GGAAATGCCT TTCAATATCC AGGGAAAACT TGAAGCGCAG
GCCCAGAAAG CCCTCACGGA GGCCAAAGCG CTTTTTGACG CAAAAGGGAT CGCCGTGAAG
ACCGTGCTCG AGACGGGCCT GGTTCCTGCG AACAACATCA TCCGCAGGGC GGAGGAAGAC
AAGCACGACC TTATCATCAT GGGCAGCACC GGCATCACCG GGCTCAAGCG GTTTCTGCTC
GGAAGCACGG CGTCGAAGGT CGTCGCGCAC GCACCGTGCA GCGTCGCGGT GATTCGATAG
 
Protein sequence
MWGNVLVATD GSERSAKAVE RALEIAEKEG AKVTLMAVAY YARDDLEEMP FNIQGKLEAQ 
AQKALTEAKA LFDAKGIAVK TVLETGLVPA NNIIRRAEED KHDLIIMGST GITGLKRFLL
GSTASKVVAH APCSVAVIR