Gene Sfum_0585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0585 
Symbol 
ID4460291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp711087 
End bp711902 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content60% 
IMG OID639701341 
Producthypothetical protein 
Protein accessionYP_844719 
Protein GI116748032 
COG category[S] Function unknown 
COG ID[COG3900] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.777226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTAC GAAAACTTCT CATTGCTGTA ATCTGTTTGT TGAGTGCATG TCTGGTCGCA 
GCCCCCGGAT CCGCTGCGCA AGGCCAGGCC GCGGTCCCCT CCGGTTCCCA GGCCGACGGC
ATGGCCATCC TCATGCGCAC GGCAAATTTT CTCGCACAGG CCGGACAGTT CAGTTTCCGA
CTTAGCGCAG GGTACGATGT GCTCCAGGAA ACGGGTCAGA AGATCGAATT CGGCGAGGTC
CGCCAGGTTA CCCTGGTTCG GCCCGACCGA ATGCGAGTGG ACACCGAGCG CAGCGACGGG
GAAAAAGCGC AGGCGATTTT CAACGGGCAG GAGATCATCG TCTACAGCCC CGGGGACAAG
GTGTACGCCA CCGCCGGCAA ACCCGGCGAC CTGGACAGCG CGCTCCGTTA CCTTGTCAAT
GATCTTCAGC TCCGTCTGCC CCTGTCCCTG ATGTACGTAC GCGACTTCCC CGCGGAACTG
GAACGCCGGA TGCTTTCCGT CGATGTGGTC GAAAAGGTTG CCGCCATGGA CGTCCCGTGC
ATCCACCTGG CGGGTCGCAC CGACACCGTG GATTTTCAGT TCTGGATTCC CACTGAGGGT
GACCCGCTGC CGCGTCGCGT CGTCATGACG TACAAGCTTG CGGAGGGGCA GCCACAGTTC
TGGGCGAATT TCACCGAATG GAATCTCTCC CCGAATCCAC CCCAGGGATT CTTCTCTTTC
ACCCCTCCGG AAGGGGTTCA GCGAATTGCG TTCCTGGCCG AGCTGGAGGT GGCAAAGCCC
GATGTGAAGA AGGTGAAAAA GGGAGGCAAA AAATGA
 
Protein sequence
MILRKLLIAV ICLLSACLVA APGSAAQGQA AVPSGSQADG MAILMRTANF LAQAGQFSFR 
LSAGYDVLQE TGQKIEFGEV RQVTLVRPDR MRVDTERSDG EKAQAIFNGQ EIIVYSPGDK
VYATAGKPGD LDSALRYLVN DLQLRLPLSL MYVRDFPAEL ERRMLSVDVV EKVAAMDVPC
IHLAGRTDTV DFQFWIPTEG DPLPRRVVMT YKLAEGQPQF WANFTEWNLS PNPPQGFFSF
TPPEGVQRIA FLAELEVAKP DVKKVKKGGK K