Gene Sfum_0579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0579 
Symbol 
ID4460285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp705058 
End bp705483 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content61% 
IMG OID639701335 
ProductNifU domain-containing protein 
Protein accessionYP_844713 
Protein GI116748026 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.503517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGACA AGACATTGGA CTTCTGGCGG AACCACTCCG TGCGATTCCT CGAAATGGCG 
CTTACGGATC ACTATCGCGA AGTTCCGGCC AATCCCGACG GATACGCCAG AGTGGTCAGA
GAGTGCGGAG ACACGGTGGA GATGTTCCTG ATGGTAAGAG ACGGCAAAAT CCGCACGGCC
TCCTTCGAGA CCAACGGCTG CATTTACTCG GTCGCCTGCG CCAACACCGC CGTTCACATG
GCCTCCGGCT TGACTCCCGA GGAGGCCCGG CGCATCACTC CGGACCAGAT CGTGGAGTTC
TTGGAAACGC TTCCGCCCGA AGAAGAGCAT TGCGCGGAAC AGGCGGTGAA AGCGCTCCGC
CTCGCCCTGG CCGATGCCCG CGACGGCGAA CGGCAGCCCT GGAAGAAGTA TTACCAGCGA
AGGTAG
 
Protein sequence
MDDKTLDFWR NHSVRFLEMA LTDHYREVPA NPDGYARVVR ECGDTVEMFL MVRDGKIRTA 
SFETNGCIYS VACANTAVHM ASGLTPEEAR RITPDQIVEF LETLPPEEEH CAEQAVKALR
LALADARDGE RQPWKKYYQR R