| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0556 |
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| Symbol | |
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| ID | 4461207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 675489 |
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| End bp | 677153 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639701312 |
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| Product | peptidase C14, caspase catalytic subunit p20 |
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| Protein accession | YP_844690 |
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| Protein GI | 116748003 |
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| COG category | [R] General function prediction only
[S] Function unknown |
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| COG ID | [COG1262] Uncharacterized conserved protein
[COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0734765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.259485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGGAT TGAGCACCAA GACTTTCTTA CTGATGATGG CGACGGTACT GCTGGCGGCG
TCCGGGCCCG TGGACCGGGT CTGGGGAGCC GACGCGGCCC CGCCGGTGGA AAATGCTTCC
CAGGCGGAGC AACGCACCGC GCTGGTGATC GGGAATGGGG CTTACGCTTC CGCTCCCTTG
CGCAATGCAG TCAACGACGC GCGCACCATG GGAGAGACCC TGAAGGGACT CGGCTTCGAT
GTGGTCGAGC ATGAGAACCT CAACCAGAAG GAGATGAAGA AGGAAATCCA GGCCTTCGGC
CAGAGGCTGC TCAAGGGGGG CGTCGGGTTG TTTTATTATG CCGGACACGG TATGCAGGTG
AACGGACGCA ACTACCTGAT TCCGGTGGGG GCTGCCATCG AGCACGAGAA ACAGGTGGAA
TACGAGGCCG TGGATGTCGG CGCGGTTCTG ACGGAAATGG ATTACGCCAG AAATCGTTTG
AACATCGTCA TATTGGACGC ATGCCGGGAC AATCCGTTTG CGCGGAGTTT CCGTTCTTCC
ATGCAGGGAC TGGCTTCCAT GAATGCCCCC ACGGGTACGA TCGTGGCCTA TGCGACGGCC
CCAGGGGCGG TGGCAAACGA CGGGCCGGGA GACCACGGAG TTTACACGGG CGAACTGGTC
AAGGCGATGG AGGCTCCCGG GCTGCGGATC GAGGACGTTT TCAAGCAGGT GCGGTCCAGC
GTGCGGGAGA CAACCCAGGG GAAACAGGTT CCCTGGGAGT CCTCCTCCCT GGAAGGAGAT
TTCTACTTCA AGTTTCCCAC CGCCGCGACC CCACCCGTTC CGGTTCCGGA CAAGCCGGTT
CCAGTGCCGC AAACGGTCAC CGCGAGAGGC GAGAAGCCTG CCAGGACACT CAAGACCTGG
AAGGAACCGA TCACCGGGAT GGAGTTCGTA TGGGTGCCCG GAGGCTGCTT TCTCATGGGC
AGCCCCCAGA CCGAGAAGGA CCGTGAAGCC GATGAAGGGC CGGTGCACGA GGTATGCGTG
GACGGCTTCT GGATGGCGCG CACCGAAGTG ACCAACGGCC AGTTCAGAAA ATTCCGTGCC
GATCACAACA GCAGGGACTA TTCCGGGGTA TCGCTCAATG GAGACAATCA GCCCGTGGTT
TATGTCACGT GGAACGATGC CAATGATTTT GCCCAGTGGC TGAAGGGTCA AAACGGCGGC
CAGTACAAAT TCCGGCTTCC CACCGAGGCC GAATGGGAAT ACGCATCCCG GGCCGGAAAG
GAGTCCTCCA GGTACTGGGG GGATGATCCG AACAAGGCCT GCACTCATGA GAACGTGGCC
GATTTGACGG CGAAACGGCA GTGGAAATGG GAGGAATCAC ACGACTGCGA CGACGGTTAC
GCGGCGATAG CCCCTGTGGG TACTTTCCAG GCGAACGATT TCGGCATTTA CGATATGCTC
GGCAACGTCT GGGAGTGGTG CGAGGACATA TACGGCGTCG ATGCCTATAC CAGGCACGAT
CGGATGAATC CGTCGTTTAC GGACCGGACT GCCGGAACCG GTCGGGTCGT CCGGGGGGGA
TACTGGCATT CGCAGCCGGG CGGCGCGAGG TGTGCCGACC GGGGCAGCGG CTTGCCCGAG
GCAATGAACG ACGATCTCGG GTTTCGATTG GTGAGGGAAC CCTAG
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| Protein sequence | MLGLSTKTFL LMMATVLLAA SGPVDRVWGA DAAPPVENAS QAEQRTALVI GNGAYASAPL
RNAVNDARTM GETLKGLGFD VVEHENLNQK EMKKEIQAFG QRLLKGGVGL FYYAGHGMQV
NGRNYLIPVG AAIEHEKQVE YEAVDVGAVL TEMDYARNRL NIVILDACRD NPFARSFRSS
MQGLASMNAP TGTIVAYATA PGAVANDGPG DHGVYTGELV KAMEAPGLRI EDVFKQVRSS
VRETTQGKQV PWESSSLEGD FYFKFPTAAT PPVPVPDKPV PVPQTVTARG EKPARTLKTW
KEPITGMEFV WVPGGCFLMG SPQTEKDREA DEGPVHEVCV DGFWMARTEV TNGQFRKFRA
DHNSRDYSGV SLNGDNQPVV YVTWNDANDF AQWLKGQNGG QYKFRLPTEA EWEYASRAGK
ESSRYWGDDP NKACTHENVA DLTAKRQWKW EESHDCDDGY AAIAPVGTFQ ANDFGIYDML
GNVWEWCEDI YGVDAYTRHD RMNPSFTDRT AGTGRVVRGG YWHSQPGGAR CADRGSGLPE
AMNDDLGFRL VREP
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