Gene Sfum_0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0520 
Symbol 
ID4461632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp630710 
End bp631516 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content60% 
IMG OID639701276 
Productcyclase family protein 
Protein accessionYP_844655 
Protein GI116747968 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.669822 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTCG ACACCCGCTT CTCTTTCTTC GCTGCCGCGA TCGTATCGCT GATTCTGCTT 
GCCGCACCGA CGACCTCCTC CGCCGCCTCG GAAGAGAAGC TCGTCGACAT GACCTTCCCT
TTTTCGGAAG AATCGATCTA CTGGCCCACC GACAAGCCCT TCACCCCGAC GGTCGTATTC
AAAGGGATCA CGGACGGCGG CTGGTGGTAT GCGTCGAATC AATATGCCGC CTCGGAACAC
GGCGGCACTC ACGTCGATGC TCCGATTCAT TTCCATGAGC ACGGACGCAC CATCGGCCAG
GTTCCGCTTC AGGAATGGAT CGGCCCCGCG GTCAAGATCG ACGTCACCGG CAAGTCCCTG
GCAAATCGCG ATTACCAGTT GAGCGTGGAA GACCTGCTCG CGTGGGAGAA GAAACACGGG
CCCATCCCCC AGGGGGCCTG GGTCATTATG TACAGCGGCA TCGACGACCG TTTCTATCCG
AACCGGAAAG AAGTGCTCGG CACCGACAAG ACCGGAATGG ATGCCGTCGC GGAGCTGCAC
TTTCCGGGAT TTTCACCCGA AGCGGTCGAC TTTCTCCTCG CCAACCGGGC GATCACCGGC
ATCGCAGTGG ATACGCCGAG CATCGATCCG GGGTCCTCGA AGGACTTCAA GGCGCATCGA
GCACTCTGCA AGGCGCAGAA GCTCGCCCTC GAGAATATCG CGAACCTGGA CAAGATTCCG
GAGTCCGGCG CGATGCTCTA CGTGATCCCC ATGTTCATTC AAAACGGGAC CGGAGCCCCC
GCGCGCGTAT TCGCGAAGCT GCCGTAG
 
Protein sequence
MQLDTRFSFF AAAIVSLILL AAPTTSSAAS EEKLVDMTFP FSEESIYWPT DKPFTPTVVF 
KGITDGGWWY ASNQYAASEH GGTHVDAPIH FHEHGRTIGQ VPLQEWIGPA VKIDVTGKSL
ANRDYQLSVE DLLAWEKKHG PIPQGAWVIM YSGIDDRFYP NRKEVLGTDK TGMDAVAELH
FPGFSPEAVD FLLANRAITG IAVDTPSIDP GSSKDFKAHR ALCKAQKLAL ENIANLDKIP
ESGAMLYVIP MFIQNGTGAP ARVFAKLP