Gene Sfum_0517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0517 
Symbol 
ID4461629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp625627 
End bp626643 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content57% 
IMG OID639701273 
Productmethyltransferase type 12 
Protein accessionYP_844652 
Protein GI116747965 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2264] Ribosomal protein L11 methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGC GGTACCTGAT AGCCTTCCTG CGAATTCTGA AAGTGCCCGG CCTGTTTCCC 
CTCATGAAAG ACTGGCAGGC ATTGGTGAGA ATGCATTTCC TCCATGCCGC TTATGAATCG
GGCCTGTTGA AAGCCCTGGC CGTTCCGTGT GAAAAGCAGG TGTTGATCGA CAAGCTTCAG
GTGAAGCGCC CGGAGCTGTT CGATGCCCTT TTGGACGTGG GACTGGCCAC AAAAGAATTG
GGAATGAAAA ACCGGCTGTT CTCCATCAAG GGCAAACGGT CCAAAGCCGT CGTGGGTGCC
AGGGGGGATA TGCTGGCCGC CATGGTCCAG GCCAACATCA CCTATTACAG CGACGCCTAT
CGCCATGCGG CCCGTCGCCT TCGAGGGGAC GATCTGGGGG ACGACCTGCA CAGGATGGGC
GATTTGGTTG CCCGGTTTTC GAAGCTCGCC GAACCGATCA TGAAGGATTT TATCGTGGGC
CTCGTTTCGG GCAGGAACCC CATGCGCATC CTGGATGTGG GGTGCGGTTC GGGTGTCTTT
CTGCATGCCG CCCACAGCGC CAACCGAAAT GCGACGGGCG CGGGCCTCGA TATCGATGAG
GCAGCCGTCC GACAGGCAAC AAACAACATC GCCCAATGGG GACTCGAGGA CCGTTTCCGC
ATTTTTCACG GAGACACGCG TCATCCCCCC GGAGGGCTCG AAGGCCCTTT CGACCTCATC
ACCCTGTTCA ACATCCTGTA TTACTTCAAT GAAGAGGATC GTATCGAACT GGTTCACAAT
CTGCGCGCCA TGCTTGCCCC TCAAGGCGTA CTGGCGATCG CGACGACCTG CCACAGCATG
GGAATGGATG TCGCCGCGGC ACACCTGAAT ATGGTCAACT GTTCCCTGAA AGGACTGACA
CGACTTCCCC GCCTGGAGGA TATTCTATCG CTGCTGCATC GATGCGGATT CCGCCGGATT
GACACGCATC GTTTCATTCC GGGAGGAACG CTCTATGGAA TCGTTGCGGG CAATTGA
 
Protein sequence
MNPRYLIAFL RILKVPGLFP LMKDWQALVR MHFLHAAYES GLLKALAVPC EKQVLIDKLQ 
VKRPELFDAL LDVGLATKEL GMKNRLFSIK GKRSKAVVGA RGDMLAAMVQ ANITYYSDAY
RHAARRLRGD DLGDDLHRMG DLVARFSKLA EPIMKDFIVG LVSGRNPMRI LDVGCGSGVF
LHAAHSANRN ATGAGLDIDE AAVRQATNNI AQWGLEDRFR IFHGDTRHPP GGLEGPFDLI
TLFNILYYFN EEDRIELVHN LRAMLAPQGV LAIATTCHSM GMDVAAAHLN MVNCSLKGLT
RLPRLEDILS LLHRCGFRRI DTHRFIPGGT LYGIVAGN