Gene Sfum_0445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0445 
Symbol 
ID4461031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp535711 
End bp536787 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content60% 
IMG OID639701201 
Productcytochrome b/b6 domain-containing protein 
Protein accessionYP_844580 
Protein GI116747893 
COG category[C] Energy production and conversion 
COG ID[COG1290] Cytochrome b subunit of the bc complex 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.706396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCA CAGGACAATC GTCAGGGAAG CTGCTCAACC GTCTTGCCCT GGACGGCTAT 
GCGGAACGAC TCTGCGCTGT GCGCGTGGCG AGCGATGCCT TCGGGTGGAC GCGTTTTTGC
GGATCATTGA GTCTGGTGCT GGTGGTCATG CTCTTTCTGA GCGGGGCCTT TCTGATGTTC
TACTATTCAC CTACCCCCGG CGCAGCCTAC GACAGCGTGG ACTTTGCTCA GTTCTCGGTG
CCCTTCGGGG ATATCGTCCG GGGCGTACAC TATTATGCAT GGAACCTGCT TCTCGTTGTC
CTGGGACTCC ACCTGGCGGG GACTTTCCTC ACCGCAGCCT ACCAAGCCCC GAGGCAGTTC
GTCTGGATTT CGGGGGTACT GATCATGTTG GTCGTGCCGC TTTTCATCAT TACAGGCGAT
CTCTTGCCGT GGGACCAGAA GGGCTACTGG ACGACCCAGG TTCGCAACAG CATCATCTCG
TCCATCCCGG TGGTCGGCGA CTTGACGCTG CGCCTGTTGC AGGGAGGGCC CCGGACAGGA
ATCGTCACGC TCACCCGGTT TTACGTACTG CACTGCCTCT TCCTGCCGTC TCTACTCGTA
GCCCTGATTG TCATTCACCT TCATTTTCTG GCGCATCGGG GGTTATCGGA ACCGCTCAGG
GAAGGCAAGA CGGACCGAGG ATGCATCCCC CTGGTCCCGG ATCTGATCAA CCGTTGGCTC
CTATTGTTCG CAGCCGTGGC GGTGGTTCTC GGCCTGGTGT CCGCGTACTG GCCGGCCCCC
CTTGACAGCC CGGCAGATCC CACGGATTCC GCCTACGTGC CCAAGCCCGA GTGGTGGGTC
CTGGCGCTGA ATCAACTGGT CAGTATCTTC AAAGGCCCCT TCATGTTCAT CGGCACGGCT
GTTATCCCCG GGGGCCTGGC CGCGCTGCTG ATAGCCCTGC CGTTCCTCGA CCGTTCCCCC
TCCCGTCACC CGGCAAAACG AAAAACGGTG ATGGTTTTGG GGGTCATAAT GCTGATCTTG
CTCTCAGGTC TTTCCCTCCT GGGCTATATT GAACACTTCA TGACTCCGCG CCCGTGA
 
Protein sequence
MNGTGQSSGK LLNRLALDGY AERLCAVRVA SDAFGWTRFC GSLSLVLVVM LFLSGAFLMF 
YYSPTPGAAY DSVDFAQFSV PFGDIVRGVH YYAWNLLLVV LGLHLAGTFL TAAYQAPRQF
VWISGVLIML VVPLFIITGD LLPWDQKGYW TTQVRNSIIS SIPVVGDLTL RLLQGGPRTG
IVTLTRFYVL HCLFLPSLLV ALIVIHLHFL AHRGLSEPLR EGKTDRGCIP LVPDLINRWL
LLFAAVAVVL GLVSAYWPAP LDSPADPTDS AYVPKPEWWV LALNQLVSIF KGPFMFIGTA
VIPGGLAALL IALPFLDRSP SRHPAKRKTV MVLGVIMLIL LSGLSLLGYI EHFMTPRP