| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0432 |
|---|
| Symbol | |
|---|
| ID | 4460399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 522328 |
|---|
| End bp | 525357 |
|---|
| Gene Length | 3030 bp |
|---|
| Protein Length | 1009 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639701188 |
|---|
| Product | phosphoribosylformylglycinamidine synthase |
|---|
| Protein accession | YP_844567 |
|---|
| Protein GI | 116747880 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain |
|---|
| TIGRFAM ID | [TIGR01736] phosphoribosylformylglycinamidine synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0117579 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.85361 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACAC GACTTGAGAT ATCGCTCAAA GAACATCTGT TTGACGCCGA AGGGGCCGGC
CTGTGCCGAA AGATCAAGGA CTACTTCGGC TGGGATGTCC AACGGGCCCG TGTCATTCAT
ATCTTGACAC TCGACACGGG GCTTACCGGG GTTGAGCTCG AGGCCGTCCG CAAGGAGATA
TTCACCAACC CGGTGACACA GGTGTCGGTG TACGGAACGT CGGCGGTTCG GTTCGACTGG
GCGATCTGGG TGGGGTACCG CCCCGGCGTG AGGGATACCG CGGGCAGTGT GGCTGTCGAG
GCCATCTCCG ATCTGCTCGG CCGGAAGCTG GGCGCGGAAG AGTCCGCCTA CACGTCCAGG
CTCTACCTCC TTTCGGGGAC CCGCCTCGGT AAAACGGAAG TCGAAACCGT TGCGCGTGAG
TTGCTTGCCA ACGACATCGT CCAGCAGTGG CGCATATACC GTTACGACGA ATGGGATCCC
GCCGGGGGAG TCGGGATCAT TCTGCCCAGG GTGGTGCTTC CGCACACTCC CGAAACCCGG
GAGATGCCCA TCGAATCCCC GGAAGACCTG ATGCGATTGA GCGACGAGCG CAACCTGGCG
CTCAATCCCC TCGACGTTCC GGTGATCCTC GACTACTTCG CTCGTCCGGA GGTCGTCCGG
GCGCGCCGCG AAATGGGCCT GGGGGCGCCC ACGGACGTCG AGCTCGAAGC GATTTCGCAA
GCCCGCAGCG ACCACTGCAA TCACAACACG TTTCGGGGGA AGTTCCACTA CCGGGATCTT
GCGACCGGCG AGCGCACGGT CGTGGACAAC CTCTTCAAGA CCTGTATCGA AGCCCCCACG
CTTGCCATCC AGGCGGAGAA GGACTGGGTG GTATCGGTCC TCTGGGACAA CGCCGGCGTT
GCCCGCTTCG ACGACAACAA CAACTACGTC ATCACCGGCG AAACCCACAA CAGCCCATCC
AACATGGAAG CCTACGGCGG AGCGCTCACG GGCATTGTGG GGATTTACCG GGACATCATG
GGAACGGGCA AGGGAGCGAG GCTGACGGCC GGCCTCTACG GGTACTGCGT GGGGCCCAAG
GATTACCGGG GTCCGTTGCG GCCGCACCTG CACCCCCGAC GGCTGCTCGA CGGCATCGTG
GAAGGGGTGA AGGACGGAGG AAACAAGCAC GGGGTTCCGA CGCCTTTCGG AAACCTGTTC
TTCCACCCGT CTTTTCTCGG CAAGTGCCTG GTGTTCGTGG CCGCCCTGGG CATCATGCCG
CGGCTGGTCC GGGGGGAACC TTCGGATCTC AAGCGCCCGG ACCCGGGAGA TTTCATCATC
ATGAGCGGCG GTCGCGTGGG CAAGGACGGT ATCCACGGAG TCACGGCATC CAGCGAGATC
TACAGTGAAA GCACCCCCGC GGGTCATGTT CAGATCGGCG ACCCCTATAC CCAGAAGAAG
ATGCACGATT TTCTGCTGGA AGCGCGCGAC GAGGGGCTCA TTTCATTCAT CACGGACAAC
GGCGGCGGCG GTCTTTCCTC CTCGGTCGGG GAATCGGCGC GGTTTTGCGG GGGCGCCCGC
GTCGAGCTGG ACAAGGTTCC CCTGAAGTAC GAAGGCCTCG ATCAGTGGGA GATCTGGGTA
TCGGAATCCC AGGAACGGAT GACCGTGGCG GTCAATCCCC GGCATCTCGA CCGGTTCATG
GAACTGTCGC GCAGGCACGA AGTGGAAAGC ACGGCCATCG GCACATACGG CTCCGACGGC
AGGCTGCACC TGACGTACCG GGGGAAGACC TGCGCGTGCC TCGACCTGAG TCTCTTCACG
GAAGCGTTCC CGCAATGGGA ATTCGAAGCC GACTGGCAAC CTCCGGACAA CCGCGGACTG
CATGAGCCGG TGCTTGCGGA ACCGGCGGAT TACGGGCGGT TGCTGCACGA TGTCCTGGCC
CGCCCCAACG TGTGCTCCCG GGAATGGATC CAGCGGCAGT ACGACCACGA AGTGCAGGGG
GGCAGCGTCA TCAAGCTGAT GACCGGCGTG GACCGTGACG TGCCCAACGA TGCGGCCGTC
CTTCGCCCCG CCCTGGAAAG CAGGCGGGGG CTGGCGGTTT CCCAGTCGAT CAATCCGACC
TATTCCGCCA TCGACACCTA CCACATGGTT GCCGCGACCA TCGATGAAGC GGTGCGGCGG
CTGGTGGCCG TCGGGGGGAG ACTTGAGGAG ATCGGAGGGG TCGACAATTT CTGCTGGCCG
AGCGTTCAAT ACGACCCCGT GAGCAATCCG GACGGCAGGT ACAAGGCCGC TCAACTCGTG
CGGGCAAACT GGGCGCTTCG AGACATCTGC CTTGCTTTCG GCATTCCGCT GCTCTCGGGC
AAGGACAGCA TGTACGTGGA CGGGCATCTT GGCGGGGCTT ACGGGGAACG GCACAAGATA
TCGGGGCTGC CGACGATGCA GTTTACGGCG ACCACCGTCG TGCCCGACAT CTCCGATTGT
CAGACCATGG ACGTCAAGAC CGCCGGGGAT CTCGTCTATG TGCTCGGCTG GACCCACGAC
GAGCTGGGAG GTTCCGAGTA TTACGATTGC TTCGGATACC TCGGGCGGAA CGTTCCCGAG
CTCGATCCCG AATCGGTGCT GCCCGTCTAT CGGGTGGTGG AAAAGGCCAT AAGGGAGGGG
CTGGTCGCCT CCTGCCACGG CATCTACCGG GGCGGGCTGG GAGTCCACGC AGCCATGGCC
GCGATGGCGG GGGGACTCGG AATGAGGCTC GACCTGGAGA AAGTGCCGGT TGCGCATGCG
GGCGCGCAGG CGAAAAGCGG TCCCGGACCG CGCGACGATC ATATCCTGTT CAGCGAGTCG
TGCGGGCGCT TCATCCTCAC TGTTTCACCC GCCATGCGCG GCGCCTTCGA AGCCATGGCG
GGCGGGCTGC CGTGCGCTCC GGTCGGGGAG GTCCTGGCCG AACCGGTGTT TGTCGTCGCC
GGGAGGAGTG GAAACGTGCT GTTGGAGGAA CCCGTGGGAG AACTGAAGCA CTCATGGAAA
TTCGGAGCGG GCGGGGAAAG AGGCGAATGA
|
|---|
| Protein sequence | MATRLEISLK EHLFDAEGAG LCRKIKDYFG WDVQRARVIH ILTLDTGLTG VELEAVRKEI
FTNPVTQVSV YGTSAVRFDW AIWVGYRPGV RDTAGSVAVE AISDLLGRKL GAEESAYTSR
LYLLSGTRLG KTEVETVARE LLANDIVQQW RIYRYDEWDP AGGVGIILPR VVLPHTPETR
EMPIESPEDL MRLSDERNLA LNPLDVPVIL DYFARPEVVR ARREMGLGAP TDVELEAISQ
ARSDHCNHNT FRGKFHYRDL ATGERTVVDN LFKTCIEAPT LAIQAEKDWV VSVLWDNAGV
ARFDDNNNYV ITGETHNSPS NMEAYGGALT GIVGIYRDIM GTGKGARLTA GLYGYCVGPK
DYRGPLRPHL HPRRLLDGIV EGVKDGGNKH GVPTPFGNLF FHPSFLGKCL VFVAALGIMP
RLVRGEPSDL KRPDPGDFII MSGGRVGKDG IHGVTASSEI YSESTPAGHV QIGDPYTQKK
MHDFLLEARD EGLISFITDN GGGGLSSSVG ESARFCGGAR VELDKVPLKY EGLDQWEIWV
SESQERMTVA VNPRHLDRFM ELSRRHEVES TAIGTYGSDG RLHLTYRGKT CACLDLSLFT
EAFPQWEFEA DWQPPDNRGL HEPVLAEPAD YGRLLHDVLA RPNVCSREWI QRQYDHEVQG
GSVIKLMTGV DRDVPNDAAV LRPALESRRG LAVSQSINPT YSAIDTYHMV AATIDEAVRR
LVAVGGRLEE IGGVDNFCWP SVQYDPVSNP DGRYKAAQLV RANWALRDIC LAFGIPLLSG
KDSMYVDGHL GGAYGERHKI SGLPTMQFTA TTVVPDISDC QTMDVKTAGD LVYVLGWTHD
ELGGSEYYDC FGYLGRNVPE LDPESVLPVY RVVEKAIREG LVASCHGIYR GGLGVHAAMA
AMAGGLGMRL DLEKVPVAHA GAQAKSGPGP RDDHILFSES CGRFILTVSP AMRGAFEAMA
GGLPCAPVGE VLAEPVFVVA GRSGNVLLEE PVGELKHSWK FGAGGERGE
|
|---|
| |