| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0413 |
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| Symbol | |
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| ID | 4461015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 501542 |
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| End bp | 503296 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639701168 |
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| Product | hypothetical protein |
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| Protein accession | YP_844548 |
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| Protein GI | 116747861 |
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| COG category | [N] Cell motility
[S] Function unknown
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1944] Uncharacterized conserved protein
[COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR00702] uncharacterized domain
[TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCAC GAGTATTCGT TGCCGACTGC TTCAAGGCTT TTCGCCACGA CCAGGACAAG
GCCAGAAGTC CCGACGACAC CGTCGCCTGG GTCAGGAAGC GGTTGTCCGG GCTCAACGTC
GATATCCTGA ACAAGACCAT CCGCATCGAC ACCGGGCGCC TCGACATTCC CGTCTACATC
AGCCTTTGCG GCTCGGATGC AACGCGCCTG ACCGGCACCA AGAAACAGAT GGGCAAAGGC
GCCTCTCCAA TCCAGGCGGA AGCGAGCGCC TTGATGGAGC TCATGGAGCG CTACAGCTTC
TTCTCGTTCA TCCACCAGAG CGATTTCCCC ACGCTCCGCT ACCGGGAAGT GCCGCAGCAG
GTGGTGTCGC CCGAGGACTT CAAGCGGTCC ATCCACGATG AGACCACGCC CGTCGACCTG
GTGAGGAGCT TCCTCCAGGA TTTTCCCCTG CGCTGGGCTG TTGCCCGGAA CCTCACGCAG
AAGATTTATC AAATGATCCC CATCGACTGG TTCTACCTCA TCAACGAGTA CAACGGTCCG
GCGGCCGGAA ACACCATCGA GGAGGCCATC CTGCAAAGTC TTTGCGAAGT GGTGGAAAGG
CATGTCGGGT CCGTCATCTG CTACGGCGAA CGCCCCACCC CGACGATCGA TCCCGGCTCG
GTTCGAGACC CGGCCGCGGT GGAACTGATC GACAAGTTCC GAAAGCAGGG GATCGTCCTG
CATCTCAAGG ACTTCTCCCT GGATACCGGG ATCCCTTCCG TCGGAGCGCT GGCCTACGAC
CCGTCGACGT TCCCCGACCG GAGCGAGATC GTCTTCACCG TCGGGACCAC CTCCAACCCC
GAAAAATCGC TCTGCCGAGC CCTGACCGAA ATCGCCCAGC TCGCGGGCGA TTTCGAGAAC
CGGACCTCCT ACCGGCCCAC TCTGCCCAAG TACGCTTCCC TCGACCAGGC GCGCTACCTG
ACGGACGATC ACGAGACGAT CCCCATCAGC GCCCTTCCCG ACCTTTCGCA CGACAACATG
CGGATCGAAA TCGAGCGTTG CGTGGACGCC CTGAAACGGA TCGGCATGGA AGTCATGGTC
ATCAACGTGG AGCACCCGGA ACTGCAGGTG CCCGCCGTCT ACACCGTCAT TCCCGGCGCC
CACTTCCTGG AGCACACGCG CGACACGGAT TTCGCCCAGC ACGCGGCGCG AACGATCCTC
AGGGGCTGCG CCCCCGGGGA GGTCGTCGCT CAGATGGAAC GGCTGCTCAA CCTTTTCGGC
CCCCGCTACG ATCTGACCTT TTTCCTCGCC CACGGCCTGG AGCTCGAAGA CAAACCCGGG
CCCGCCATCC CGCTTTTCCG CAAGGCGCTC GAACAGGAAC CGGACCCGAG AGAGCTGGCG
AGCATCCACG TCCACATTGC CTCCTGCCAC AAGGCGCTGG GAGAATACGA ACCGGCGCTC
GAAGCCCTGG AGCGCGCGGA GCTGCTCAAC AGCGAGCTCA AGGAAATCTA TAATCTGCGG
GGATTCTGCT ATTTCAAGCT GAAGAAGCAT CACGAAGCGA TCGAGGCGTT CGAGAAGGCG
ATCGAACTCG ACCCGGGGTC GGCCATCGAC TACGCCAACA TCGGGTCCAA CCTGAGGGAC
CTCGGCCACA GGGAAGAAGC CATCAAGGTC TACCGGATCG CCCTCGAGCT GGACCCCGGC
ATCGATTTCG CCCGGGAGAA CATCGACCGG CTGGAAGCCG ACCTGGCCCG GGAGCGGGCC
GCGGGGCAGA GCTGA
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| Protein sequence | MSSRVFVADC FKAFRHDQDK ARSPDDTVAW VRKRLSGLNV DILNKTIRID TGRLDIPVYI
SLCGSDATRL TGTKKQMGKG ASPIQAEASA LMELMERYSF FSFIHQSDFP TLRYREVPQQ
VVSPEDFKRS IHDETTPVDL VRSFLQDFPL RWAVARNLTQ KIYQMIPIDW FYLINEYNGP
AAGNTIEEAI LQSLCEVVER HVGSVICYGE RPTPTIDPGS VRDPAAVELI DKFRKQGIVL
HLKDFSLDTG IPSVGALAYD PSTFPDRSEI VFTVGTTSNP EKSLCRALTE IAQLAGDFEN
RTSYRPTLPK YASLDQARYL TDDHETIPIS ALPDLSHDNM RIEIERCVDA LKRIGMEVMV
INVEHPELQV PAVYTVIPGA HFLEHTRDTD FAQHAARTIL RGCAPGEVVA QMERLLNLFG
PRYDLTFFLA HGLELEDKPG PAIPLFRKAL EQEPDPRELA SIHVHIASCH KALGEYEPAL
EALERAELLN SELKEIYNLR GFCYFKLKKH HEAIEAFEKA IELDPGSAID YANIGSNLRD
LGHREEAIKV YRIALELDPG IDFARENIDR LEADLARERA AGQS
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