| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0411 |
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| Symbol | |
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| ID | 4461013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 496079 |
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| End bp | 499339 |
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| Gene Length | 3261 bp |
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| Protein Length | 1086 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639701166 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_844546 |
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| Protein GI | 116747859 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCAAC AGCAATGCTC AAACAGCAAG AATTTCGAAG AACCTTCGTC AAGTTCAGCT
GAGCATATGC ATACTGATTT GTCTTTTATT ACAAACGAAC AGCATCAAAG TTTAAGAGAT
CGATTTGAAG TGCTCATTAA AGACACTTCT TTTTTTGACT GCCTGGTGGG ATATTTCTAT
ACCAGCGGCT TCCATGCGTT GTATCACTCA TTGGAGAAAA CCGAAAAAGT CAGAATCCTC
ATTGGTATCA GCACCAACCG GCAAACCTAT GACTTATTGG TGAAAGCGGG CAGCCCCACG
CAAGAGGTCA TGCAATTCTC TCATGCCGAA ACCAAAGAGG AAATCGAAAA GCTCGTTGAG
GATGAGTTCG CAGACTCCGA AGACAACCGA AACGTTGAAG CCGGAGTCCA CAAGTTTGTG
GCGTGGGTCA AGGACAAGAA GTTGGAAATC CGGGCCTATC CGTCGCACAA CATTCACGCC
AAACTCTATA TTATGACTTT TTGCGAGGGA GATCGAGATG TTGGCAGGGT TATCACCGGT
TCGAGCAACT TCACCCAAGC CGGATTGATC GATAACCTGG AGTTCAATGT GGAGTTGAAA
AACCGCAGTG ACTATGAGTA TTCCCGAAAG AAGTTCGAGG AGTTGTGGCA ATCGGCGGTG
GACGTCGGCG AGCGCTATGT ACAGACCATC CAACAGAAGA CTTGGCTCAG CCGGAATATC
ACGCCCTATC AACTCTATTT GAAATTGCTC TACGAGTATT TCAAAGATGA GCTCAGTCAG
ACCGATGAGG TGTTTATCAA ATACCTGCCC GAGGAGTTCA AGAAGCTGGA GTACCAGGAG
CAGGCCGTCT TGAACGCCAA GAAGATTTTG CTGGAATACG GCGGGGTTTT CATTTCCGAT
GTGGTCGGGT TGGGCAAAAC CTATGTCTCG GCCATGCTCG CCGGGCAACT GTCCGGCCGA
ACCTTGATCA TTGCTCCGCC GGTACTGCTC GAGAAAACCA ATCCCGGTTC CTGGCCCAAT
GTGTTTTCCG ACTTTCGCGT GTCTGCTGAT TTTGAATCGT TGGGCAAGCT CGACGATCTC
CTCAAACGGG GCACCGAGAA ATATGAAAAC ATCATCATCG ATGAAGCCCA CCGTTTCCGC
ACGGAAACCA CGGCGACCTA TGAGAAACTG GCGGAGGTCT GCCGGGGCAA GCGGGTGATC
CTGGTCACAG CGACACCGTA CAATAACGCG CCCAAGGATA TCTTGAGCCT GCTGAAACTC
TTTCAAAAAG CCAAGAAAAG CACGATTCCC AATCTACCCG ATCTTGAAGG ATTTTTCAGC
CGCCTGGAGC AGAAGCTCAA GAACCTGGAT CGCCAGAAGG ACTATGACAA ATACATCAGC
ACGGTCAAAG AGAACGCCCG GGAAATTCGG GAAAAGGTGC TGAAGTACCT GATGGTGCGG
CGGACCCGGA CCGAGATCGT CAAATACTTT GCCGAGGATA TCCACCAGCA GCGGCTGAAA
TTCCCCGTGG TGGAGAGACC GGTGCCGCTG TTTTACGAGC TCAACGGGAA GGAAGACCTG
GTCTTTACCA AGACCGTTGA GCTCATTGCC CAGAAGTTCA AATATGCTCG ATACATGCCC
CTGCTTTATT ATCAAGGCAA GGTGGACCAG CTGGAAAAAC AATCTCAGCG GAACATGGGC
CGGTTTATGA AGATTCTGCT GGTCAAACGC CTGGAAAGCA GTTTCTTTGC CTTCAGGAAT
TCGATTGACC GGTTCCTCCG TTCCTACGAG CTGTTCATCA AGGAATTTGA CAACGGCAAT
GTTTACGTCA GCAAGAAGCA CACCCGCAAA ATCTTTGAAC TGCTGGAAAA CGATGACGAT
GACGCCGTGC AGCGGCTGAT CGACGAAAGC AAGGCAGAGC GTTATCCCAG CAGCGAATTT
GCCGAAGCGC TGCGGCAGGA CCTCCAGCAT GACCGGGATG TGCTCTTGGA GATCAAGGAG
CTGTGGACCC GGGTGAAACG CGATCCCAAG CTCTTCACTT TTCTCAATGA ATTATCGACC
GACGCCGGAC TCAAAAAGAA TCATCTCATC ATCTTTACCG AATCCAAGGA AACCGCGGAC
TATCTGTTTG CCAATTTAGA GCACCACTAT CCGGAAAAGG TGCTGTGCTA TACCGGCGCC
TCGGGGGAAG CCACCCGGGA CAAGGTGATT GAAAATTTCG ATGCCCGAGC CCGCCATCCC
AAGCAAGATC ATCGCATTCT GGTAGCCACC GAGGTATTGG CGGAAGGCGT GAACCTGCAC
CGCTCCAATA CGGTGATCAA CTATGATATC CCCTGGAACC CAACGCGCAT GATGCAGCGG
GTCGGCCGCA TCAACCGGAT CGATACGCCG GCGAGCACGA TCCACACCTA CAATTTTTTT
CCCACCACCC AATCCAATGA CCAGATCAAG CTCAGAGAGG CGGCGGAAGC CAAGATCAAC
GCCTTCTTGA CCCTCCTGGG CGGCGATGCG GAACTGCTGA CCGAAGGAGA GCCGATCGGC
TCCCATGAGC TGTTCGACCG GTTGCTGTCC AAGCACACCC TGGAAGGCGA TGAGGAGCAA
GGAGAGACCG AGCTGAAGTA TCTCCACGTT ATCAAGGAAA TCCGCGACAA GCATCCGGAC
CTCTTTGAAA AGATCAAGCG GCTGCCCAGG AAGGCCCGCA CCGCCAAGAC TCACGCCGAA
CAGGCCGATT CCCTCATCAC CTATTTTCGC AGGGGGAAAC TGCAGAAGTT TTTCCTGGCG
GCGGATCATC CGGAAGCCAA AGAGCTGGAT TTCCTGCTGG CGGCTAAATT CATGGAAAGC
GGATCGGAGG ATGCAAAGAG AGAGCTGCCC AGTCAGTTTT ATGACTTATT GGACAAAAAC
AAGGAAGCGT TCGTTCTGGC CACTACGGAA GAACTGCCTC AACCCAGGGC CAAGGGCGGA
GGCCGGGACA GCGCCGCCAA CCTTCTCAAG ATTTTGAAGG TGACGCAGAA GAACACCCAA
AAGCTGACCG ACGATCAGGA ACTCTTCCTC AAGAAGGTCT TCACACAGCT GGCGGAAGGC
GGGCTGCCGA AGCAGACCGT CAAACAAACC CTGAAAGCCC TCAACGATCT CAAGAATGAA
TTGATCAATC CGTTCAAGGT GCTGGCAGTG CTCCAGACCC ACATTCCCCC CAAGCTCCTG
GAAGGGCATT ATGCCGAACA AAACCCGTCG GTCTCCGGTA AGCGGGAAGT CATTTTGTCG
ATGTATTTGA GCGGTGAATA G
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| Protein sequence | MVQQQCSNSK NFEEPSSSSA EHMHTDLSFI TNEQHQSLRD RFEVLIKDTS FFDCLVGYFY
TSGFHALYHS LEKTEKVRIL IGISTNRQTY DLLVKAGSPT QEVMQFSHAE TKEEIEKLVE
DEFADSEDNR NVEAGVHKFV AWVKDKKLEI RAYPSHNIHA KLYIMTFCEG DRDVGRVITG
SSNFTQAGLI DNLEFNVELK NRSDYEYSRK KFEELWQSAV DVGERYVQTI QQKTWLSRNI
TPYQLYLKLL YEYFKDELSQ TDEVFIKYLP EEFKKLEYQE QAVLNAKKIL LEYGGVFISD
VVGLGKTYVS AMLAGQLSGR TLIIAPPVLL EKTNPGSWPN VFSDFRVSAD FESLGKLDDL
LKRGTEKYEN IIIDEAHRFR TETTATYEKL AEVCRGKRVI LVTATPYNNA PKDILSLLKL
FQKAKKSTIP NLPDLEGFFS RLEQKLKNLD RQKDYDKYIS TVKENAREIR EKVLKYLMVR
RTRTEIVKYF AEDIHQQRLK FPVVERPVPL FYELNGKEDL VFTKTVELIA QKFKYARYMP
LLYYQGKVDQ LEKQSQRNMG RFMKILLVKR LESSFFAFRN SIDRFLRSYE LFIKEFDNGN
VYVSKKHTRK IFELLENDDD DAVQRLIDES KAERYPSSEF AEALRQDLQH DRDVLLEIKE
LWTRVKRDPK LFTFLNELST DAGLKKNHLI IFTESKETAD YLFANLEHHY PEKVLCYTGA
SGEATRDKVI ENFDARARHP KQDHRILVAT EVLAEGVNLH RSNTVINYDI PWNPTRMMQR
VGRINRIDTP ASTIHTYNFF PTTQSNDQIK LREAAEAKIN AFLTLLGGDA ELLTEGEPIG
SHELFDRLLS KHTLEGDEEQ GETELKYLHV IKEIRDKHPD LFEKIKRLPR KARTAKTHAE
QADSLITYFR RGKLQKFFLA ADHPEAKELD FLLAAKFMES GSEDAKRELP SQFYDLLDKN
KEAFVLATTE ELPQPRAKGG GRDSAANLLK ILKVTQKNTQ KLTDDQELFL KKVFTQLAEG
GLPKQTVKQT LKALNDLKNE LINPFKVLAV LQTHIPPKLL EGHYAEQNPS VSGKREVILS
MYLSGE
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