Gene Sfum_0382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0382 
Symbol 
ID4461615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp457775 
End bp459103 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content64% 
IMG OID639701137 
Productphenylacetate--CoA ligase 
Protein accessionYP_844517 
Protein GI116747830 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTGT CGCAGAATCC CATCGCCGTG ATGTCGCGGG ATGAGGTAGG CCAGTTGCAG 
CTCGAGCGGT TGCAGATGAC GCTGAACAGG GCTTACTTCA AAGTCGATTT CTACCGCAAG
CGCATGGACG TTCTCCGAAT GCTTCCCGAA GACGTCGGGA CGTTCGAGGA CTTCCGTCAA
TTTCCCTTCA CCACCCGCGA AGATCTGACC GACCATTACC CTTACGGGCT CTTCGCCGTG
CCGCTCCGGA GCATCGTGCG GCTCAAGATC ACTTCGCCGC CTCTTCGGGA CCAGACCAGG
CCGATCGTGG TCGGGTTCAC CCGACACGAC ACGGCGATGT GGCAGACGCT CATGGTGCGC
CTGTTCGAGC AGCTCGGGGT GACGGACCGG GACATCGTGC AGGTGGCGTT CAACTTCAGC
CTGTTCCCGG GAGCCTTTAC GTTCAACCAC GCGGCCGAGA TGCTGGGGGC CACCCTCGCC
CCTTCCGCCA CTATTTCCGC GACCATGCAA CTGCGCATCA TGCAGGATTT CCGATCCACG
GTGCTCGCCA CGACGGCGGC ATTCGCCCTG CACATCGTGG ACACCATGGA GCGGCAGGGC
TGGGATGCCT CAGGCCTTCA TCTGCGACTC ATCCTGCTGG GACCCGACCC ACTCTCCGAA
ATCACCCGCA GGCGCGTGGA AGCAGTCTTC GGCGTCCCGG TTTACGGTCT CTACGGGGTT
GCCGAGATGG GCGAGCCGGG AATGGCGGGC GAATGCCCGT CCAGGCAGGG GCTGCACCTG
GCGGAAGACC AGTTCCTGGC GGAAATCGTG AACCCGGCCA CCGGAGAGCC GCTTGCGCCC
GGCCAGGAAG GGGAGTTGGT TCTCACGACG CTGACCGCCG AGGGCTACCC CCTCATCCGC
TTCCGCACGG GCGACATCAC CGTGCTGCGC GACACGCCCT GCGCGTGCGG CTCCACCCTC
GCCCGCATCA TTCCCATCCT GCGCCGCACC GACAACCGCG TCTCCATCCG GGGCATTCCC
GTCTACCCGG AACACGTCGA AGAGCTGCTC AAAGGCGTCG ATCCAGGCAT GGAGGACTTC
CGGTTGGTCA TTCACACGCA ATACGGCATC GGCGAGCAGA TGGAAATCCT GATCTGCCGC
TCCGCAACCG ACGATCTGCC GGGAGGCAAT CGCGCCCAGT ACCTGGAGCT CCTGAGAAGC
CAGGTGAGAC GGGCGCTCGG TCTCGGTGTA AGAGTGCAGG TCGTCGAACC GGAACGCCTG
CCCCGCGAAG GGCTGACCTA CAAGACGGTC TTCCGAAACG TCTCTCCATT TTCGAACGAC
GTTCCGTGA
 
Protein sequence
MAVSQNPIAV MSRDEVGQLQ LERLQMTLNR AYFKVDFYRK RMDVLRMLPE DVGTFEDFRQ 
FPFTTREDLT DHYPYGLFAV PLRSIVRLKI TSPPLRDQTR PIVVGFTRHD TAMWQTLMVR
LFEQLGVTDR DIVQVAFNFS LFPGAFTFNH AAEMLGATLA PSATISATMQ LRIMQDFRST
VLATTAAFAL HIVDTMERQG WDASGLHLRL ILLGPDPLSE ITRRRVEAVF GVPVYGLYGV
AEMGEPGMAG ECPSRQGLHL AEDQFLAEIV NPATGEPLAP GQEGELVLTT LTAEGYPLIR
FRTGDITVLR DTPCACGSTL ARIIPILRRT DNRVSIRGIP VYPEHVEELL KGVDPGMEDF
RLVIHTQYGI GEQMEILICR SATDDLPGGN RAQYLELLRS QVRRALGLGV RVQVVEPERL
PREGLTYKTV FRNVSPFSND VP