| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0371 |
|---|
| Symbol | |
|---|
| ID | 4461604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 443514 |
|---|
| End bp | 444650 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639701126 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_844506 |
|---|
| Protein GI | 116747819 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.948328 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATGA CCGGCAATCA GAGCCATCAC GACAACCGCA CCGGCGGGGC CGATGCGGAA
TCGAGCGCCC CGCCGGGACT TCGTCTCCCT TCTCGCGAAC GGGTCAAGTT CCTGCTGATT
CGGCGCGACA ACATCGGCGA CCTGGTTTGC ACGACGCCGT CCATTCTTGC CCTGCGCCGA
ACCTTTCCGC AATCCCGGAT CGATCTGATG GTAAACGGGT ACAACGCGGA CGCAATCGTC
GGGTTGCCGG AGCTGGACAC CGTTCACATC TACCACAAGT CCAAACATGG ACGCTTCCGA
TACGGGTGGC AGAATCACTT TCACTTGCTC GATCTTTTCC GCAAAATCAG GCGCGAACGA
TACGACGTCG CAATCGGTGT GGCCGGCCAG TTCAACAAGA CAACCGCACG CTTCACGCTC
ATGAGCGGAG CCTTCCACAG GATCGGCTAC GCAAGCCGTG CGTCTGCAAT CCCGCTGTTC
GAACGTCTTT GTTACACGCG GCTCGTGGCT CCGCCGGACC CCGGTTGCGG CGCGCACGAA
GTTGAACTGT CCTACCGGCT CCTGGCTCCT CTCGGTATCA GGGACACTCC CGGCCCCATG
AAGCTGGCGG TCCGCCGCGA GTGTTTGCAA GAAATCCGGG ACCTGTTATT GTCCCGAAAT
GCCGTGGGAC CGGTGGTCGG ATTGCACATC AGCAGCCGTA GGCCGGAAAA CCGTTGGGCT
CCCGAAAACT TCGTCGAGTT GGCCCGAATG GTGTCGAGGG AAAGACCCGA AACGAAATTC
CTGATTCTGT GGGCGCCGGG AGATGCCTCG AACCCTTATC ATCCGGGAGA CGACCGGAAA
GCCCGCGACA TTGCGGAAGC CTTGCGCGAT TGTGCGGTTC CCTGCAGAAC CGACACCATC
CCCCGGTTGA CCGCCGCGAT GAGCGCCTGT AGATTGGTTA TATGTGGGGA TGGAGGCGCG
ATGCATATCG CGGCCGCCCT TCAGCGGCCC GTGGTCGCCA TTTTCGGATC GAGCGACGCG
TCCAGGTGGC GCCCCTGGGG AACAAAATGC GAACTGCTTC AGAAGGGACG GAAGGCGGAC
GACAACTCGG TGGAAGAAGT CTATCGATGC TGTGGAAAAC TCATGATCGG CAGTTGA
|
|---|
| Protein sequence | MRMTGNQSHH DNRTGGADAE SSAPPGLRLP SRERVKFLLI RRDNIGDLVC TTPSILALRR
TFPQSRIDLM VNGYNADAIV GLPELDTVHI YHKSKHGRFR YGWQNHFHLL DLFRKIRRER
YDVAIGVAGQ FNKTTARFTL MSGAFHRIGY ASRASAIPLF ERLCYTRLVA PPDPGCGAHE
VELSYRLLAP LGIRDTPGPM KLAVRRECLQ EIRDLLLSRN AVGPVVGLHI SSRRPENRWA
PENFVELARM VSRERPETKF LILWAPGDAS NPYHPGDDRK ARDIAEALRD CAVPCRTDTI
PRLTAAMSAC RLVICGDGGA MHIAAALQRP VVAIFGSSDA SRWRPWGTKC ELLQKGRKAD
DNSVEEVYRC CGKLMIGS
|
|---|
| |