| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0359 |
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| Symbol | |
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| ID | 4460876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 425356 |
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| End bp | 427839 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639701114 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_844494 |
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| Protein GI | 116747807 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0267919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.617485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTGGA TACCCGTTCA TTTCACTTAT CATGTGGGCC TGCAAGGCGG CATATTCCGC
AATGTCAGGC TGGTGGGCAG CTGGGATGCA AACGGCAGCC ATTCCGACCA ATGGACCGGC
GTTCCCATGC GGGAAGAGGT CTCGGACAGC GGCTGCCCCT GCTTCAGGGC CACCGTGAAC
CTCAACGGCG ACCAGGCCGG GTGGACCTTC GGCTGGGGCG TTCTGCTCGA CGGCCCGGGA
GGCGCCAATC GATGGGGCAT CACCACGGAA GTGCACGACC GCAACTCGTC GGAACGGTTC
CGCGGATTCC AGCTCAAAGG GCCCGAGCAG TTCAACGAAT ACCATCTCAC CCACTGCCGC
CGGTTGGGCG CCAACAAGCT CCACCGTCCC GGCGGCGGTG AGCCGGCCGT ACGCTTTGCC
GTCTGGGCGC CCAACGCGCT CCACGTCGAG ATGGTGCGCG GGGATGCCGC CACGGGCTAC
ATTGACGACA ACGGCACGGG GGCACTGGCC GCGTTCCCGA TGCACAAGGA GATGGTCGAC
GGAACGTGGA CCGGGATATG GCGTACCGAC GACGATTCAG AGGGTCTGGA GAGCTTTGCG
CAGTTCGATC ACACGCCCTA CATGTTCAGG ATCACCAAGG ATGACGATAC CGTCTGCTAC
CGGACGGACC TCTATTCCAG GTGCCAGATC GGGAGCGGCA AAAAGAATCC CGAGGGGAAA
AAGTACGACG GAAGACCGAC CGGGCTGGCC GGGTCGGTGA GTTGCTCGGT GGTGGTCGAT
CCCGAACGCG TCACCGAGCT CTTCGATGAG CCCTTTCCTC AGAAGCAATG GCTGGACGCG
GACGAGTTCT GGAAAAACGA GTTCGATCCG CTGCGCCCGG TGCCGACGCG CATCGACGAC
CTGGTCATCT ACGAAATGCA TGTCCCCGGG CTGGGATGCG GGAAAACGGA TGCCGCCGGT
GAGCCGTTCA CCGGCGATCT GAAGGATGCC GTGCAGATGC TGGATTACCT GGTCGATCTT
GGCGTCAACG CCGTGGAAGT CCTGCCGATG AATGAATTCG AGGGATGGGC GGCCTGGGGC
TATGCGACGT CCCACTATTT CGCCGTCGAG TACGCGGGGG GAGGGCGTGA CCAGTTCAAG
CACTTCGTGC GTGAATGCCA TCGGCGCGGC CTTGCGGTGC TCCTGGACGT CGTTTACAAT
CATTACGCGC ACAACGCCGA AAGAGCGGAA TGGATGTACG ATTCCAATCG TCACGAGAAG
AACATCTACT ACTGGTACGA GGGCATGCCG TCCGATTATC GCGACTACGA GCACGCCGCC
GGCGATCCGA CCCTCGATCC CCGCAAAAGG CCCGCTTCCG GTCACGGAGG GTACGTCGAC
AACATGTCCA CCGGCTATGC GCCCCGGTTT TGCGAGGAAA TGGTGCGCAA GATGTTCATC
AGCAGCGCCG CGGCCCTGGT GCATGAATTC CACGTGGATG GGTTCAGGGT GGATCAGACC
ACCTCCATCC ACAGCTACGC CGTGGTCCAT GCCGACGGCC GCGCCGCCGC CGATGCCCGC
ATTTTCGGCG CCAAGTTCCT TCGAGAGCTC ACGCGCACCC TCAAACTGAT CAAGCCGACG
GTCATGCTCA TCGCCGAGGA CCATTCCGGA TGGTCCGCCG TGACGGAACC CCCGGACAAG
GGCGGTCTGG GTTTCGATGC ATACTGGTAT GCCGATTTCT ATCATCACCT CATCGGCGAT
ACCGACAAGG GCGCCGACTA CGCAAAACTC ATCAAGACCT GCGGCTTTGG CGACGACCGC
CCCCTGGCCG TCGATTATTT CGTCGGCGCG CTGCGGCATG CGGGCAACCT TACCGTCGTA
TACCACGAAT CCCACGACGA GGCCGGAAAC GCGAAGTTCT CGGGGCGCAC CATCGCCGTG
GCCGTCAACC GGGCGACTCT TTCGGGGGAG ACGAGGCGCT GGGCCGAAGC GCGCTGCCGC
CTGGCCTGCG GCCTGAACAT GCTGTCTCCG GGAGTTCCCA TGTTCTTCAT GGGAGAGGAG
GTCGGGTTTC AGAAGGATTA TCCGTACGAT CTCTTTCTGA GCCAACGGGA GGATTTTCTG
CGCGAGCGCG GTGGCAGCGG TGCGAACCTG TTCAGGTTCT ACCAGGACAT CATCAAGCTG
CGTCGCCGAA AACCCGCGCT GCGAACGGCC GGGCTCGTTC CGCTGCACGT CCGCAACGAC
AACCGCGTGC TGGTGTTCAG GCGCTCCCTG GAAAACGAGC ACCTCATCGT TTTCGCCAGT
TTCAACAATT ACGCATTCGT CGACGGCTAT CGCGTGAACG AAGCCGAAAT CCCCGATGGC
GCCTGGCGGG AGATCTTCAA CAGCGACGCG GCCGTCTACG GGGGCAACAA CGTCGGCAAC
GGCGGGATGG TGCGTGAGTC CCGATACGGT TCAATGGACG CCGTCATCCC CGCAAACGGA
TTCGTCGTTT TCGAAAGGCT GTAG
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| Protein sequence | MSWIPVHFTY HVGLQGGIFR NVRLVGSWDA NGSHSDQWTG VPMREEVSDS GCPCFRATVN
LNGDQAGWTF GWGVLLDGPG GANRWGITTE VHDRNSSERF RGFQLKGPEQ FNEYHLTHCR
RLGANKLHRP GGGEPAVRFA VWAPNALHVE MVRGDAATGY IDDNGTGALA AFPMHKEMVD
GTWTGIWRTD DDSEGLESFA QFDHTPYMFR ITKDDDTVCY RTDLYSRCQI GSGKKNPEGK
KYDGRPTGLA GSVSCSVVVD PERVTELFDE PFPQKQWLDA DEFWKNEFDP LRPVPTRIDD
LVIYEMHVPG LGCGKTDAAG EPFTGDLKDA VQMLDYLVDL GVNAVEVLPM NEFEGWAAWG
YATSHYFAVE YAGGGRDQFK HFVRECHRRG LAVLLDVVYN HYAHNAERAE WMYDSNRHEK
NIYYWYEGMP SDYRDYEHAA GDPTLDPRKR PASGHGGYVD NMSTGYAPRF CEEMVRKMFI
SSAAALVHEF HVDGFRVDQT TSIHSYAVVH ADGRAAADAR IFGAKFLREL TRTLKLIKPT
VMLIAEDHSG WSAVTEPPDK GGLGFDAYWY ADFYHHLIGD TDKGADYAKL IKTCGFGDDR
PLAVDYFVGA LRHAGNLTVV YHESHDEAGN AKFSGRTIAV AVNRATLSGE TRRWAEARCR
LACGLNMLSP GVPMFFMGEE VGFQKDYPYD LFLSQREDFL RERGGSGANL FRFYQDIIKL
RRRKPALRTA GLVPLHVRND NRVLVFRRSL ENEHLIVFAS FNNYAFVDGY RVNEAEIPDG
AWREIFNSDA AVYGGNNVGN GGMVRESRYG SMDAVIPANG FVVFERL
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