Gene Sfum_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0345 
Symbol 
ID4460706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp408046 
End bp409005 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content61% 
IMG OID639701100 
Producthypothetical protein 
Protein accessionYP_844480 
Protein GI116747793 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1530] Ribonucleases G and E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.195758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA GAGCGAAGAT TCGGAGCATC TACAGTACCG CCTTGACCAA GCTTCTCCTC 
GATTCGGGAC ACCGCGTGGT CGAGCCGTCC GTCAAAATCC GCGAGCGCTT TTCCATCGAA
CCCTGCGACG AAACCCACGA TGTCCTGCTC ATGGATCGAG ACGATTTCCA GGGACTGGAC
ATTTTCGGCG AAGCGGAGTC CATCTGCCGC TTGCTGGACT GCATCCGAAA GCATCTGCTC
GATGCGGTGC TGGTCGAACT GGACCAGGAC GATTCCGACG ACGGCCTGAT GAGCGCCCGG
ATGGAGCTGC CGGGCGCTTC CAAGGAAGCG CTCGACCAAC TCCGCTATGC GGTAACGCCC
ACCCTGCTGC GGCATCATCG ACTGCGGATC GTGGACAGCA CCGCGCTCGA GCGCGCCGAA
GGGACCCTCT CCCTGCATCC CGAGAAGAAA GGCGAGCTGG AGAAGGACCT TTTCCTGCAG
GCAATCCTCG CGCCCCTGGA AAAGGCCGGG GTGGTGAGGG TCGAACACGT GAGGCCCTCT
GGAAAATCCA TGCGGCCGCG CGAGGGGGTG CTGGTCAACG CGACCCCGGA GTCCATCCTC
TTCAGGCGCT CCTTTTCAAA GGGAGGCACC TACGACGGCC TCGATGTGCC CATCCAGGCC
GGAGACTACG GACTGACCAC CATCAGGGAA GGTGCCTGGT TCGTCAAACA TGCTTATTAC
ACCAAAGATG ACAAGCTCAT CGGAGAGTAT TATAACGTCA ACACCCCGGT AGAGCTCTAC
CCCTACGGTG CCCGGTACCT GGACCTCGAG GTCGATGTCG TGAAGAAGGC GGGGCGAAGA
CCCAGGTTGC TGGATCGTGA GAAACTGGCG TTGCTGTCCC GGCGGGGGGC CATCGGCAGC
GCTCTCGAAT CGAAGGCCAT GGCGGTGGCG GGGGAGCTCA TGCAGACGCT GGCGGGGTGA
 
Protein sequence
MTIRAKIRSI YSTALTKLLL DSGHRVVEPS VKIRERFSIE PCDETHDVLL MDRDDFQGLD 
IFGEAESICR LLDCIRKHLL DAVLVELDQD DSDDGLMSAR MELPGASKEA LDQLRYAVTP
TLLRHHRLRI VDSTALERAE GTLSLHPEKK GELEKDLFLQ AILAPLEKAG VVRVEHVRPS
GKSMRPREGV LVNATPESIL FRRSFSKGGT YDGLDVPIQA GDYGLTTIRE GAWFVKHAYY
TKDDKLIGEY YNVNTPVELY PYGARYLDLE VDVVKKAGRR PRLLDREKLA LLSRRGAIGS
ALESKAMAVA GELMQTLAG