Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0345 |
Symbol | |
ID | 4460706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 408046 |
End bp | 409005 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639701100 |
Product | hypothetical protein |
Protein accession | YP_844480 |
Protein GI | 116747793 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.195758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCA GAGCGAAGAT TCGGAGCATC TACAGTACCG CCTTGACCAA GCTTCTCCTC GATTCGGGAC ACCGCGTGGT CGAGCCGTCC GTCAAAATCC GCGAGCGCTT TTCCATCGAA CCCTGCGACG AAACCCACGA TGTCCTGCTC ATGGATCGAG ACGATTTCCA GGGACTGGAC ATTTTCGGCG AAGCGGAGTC CATCTGCCGC TTGCTGGACT GCATCCGAAA GCATCTGCTC GATGCGGTGC TGGTCGAACT GGACCAGGAC GATTCCGACG ACGGCCTGAT GAGCGCCCGG ATGGAGCTGC CGGGCGCTTC CAAGGAAGCG CTCGACCAAC TCCGCTATGC GGTAACGCCC ACCCTGCTGC GGCATCATCG ACTGCGGATC GTGGACAGCA CCGCGCTCGA GCGCGCCGAA GGGACCCTCT CCCTGCATCC CGAGAAGAAA GGCGAGCTGG AGAAGGACCT TTTCCTGCAG GCAATCCTCG CGCCCCTGGA AAAGGCCGGG GTGGTGAGGG TCGAACACGT GAGGCCCTCT GGAAAATCCA TGCGGCCGCG CGAGGGGGTG CTGGTCAACG CGACCCCGGA GTCCATCCTC TTCAGGCGCT CCTTTTCAAA GGGAGGCACC TACGACGGCC TCGATGTGCC CATCCAGGCC GGAGACTACG GACTGACCAC CATCAGGGAA GGTGCCTGGT TCGTCAAACA TGCTTATTAC ACCAAAGATG ACAAGCTCAT CGGAGAGTAT TATAACGTCA ACACCCCGGT AGAGCTCTAC CCCTACGGTG CCCGGTACCT GGACCTCGAG GTCGATGTCG TGAAGAAGGC GGGGCGAAGA CCCAGGTTGC TGGATCGTGA GAAACTGGCG TTGCTGTCCC GGCGGGGGGC CATCGGCAGC GCTCTCGAAT CGAAGGCCAT GGCGGTGGCG GGGGAGCTCA TGCAGACGCT GGCGGGGTGA
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Protein sequence | MTIRAKIRSI YSTALTKLLL DSGHRVVEPS VKIRERFSIE PCDETHDVLL MDRDDFQGLD IFGEAESICR LLDCIRKHLL DAVLVELDQD DSDDGLMSAR MELPGASKEA LDQLRYAVTP TLLRHHRLRI VDSTALERAE GTLSLHPEKK GELEKDLFLQ AILAPLEKAG VVRVEHVRPS GKSMRPREGV LVNATPESIL FRRSFSKGGT YDGLDVPIQA GDYGLTTIRE GAWFVKHAYY TKDDKLIGEY YNVNTPVELY PYGARYLDLE VDVVKKAGRR PRLLDREKLA LLSRRGAIGS ALESKAMAVA GELMQTLAG
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