Gene Sfum_0332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0332 
Symbol 
ID4460970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp395006 
End bp395467 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content56% 
IMG OID639701087 
Productcache type 2 domain-containing protein 
Protein accessionYP_844467 
Protein GI116747780 
COG category[T] Signal transduction mechanisms 
COG ID[COG4564] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0349612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.499668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA AGCTATTGAT CGCCGTTGTG ATCGTTGTGC TGGGCCTTTC CTGGGCGTAT 
GCCCAGCAAC AGCAGGCCGT AGACGAAAAG GCCTTGGCCA AGGCGATGGT GGAAAAGGCC
GCCGCCTTTC TGAACGAAAA CGGGAAGGAG AAGACCATCG CGGAAATCAA CAAACCTGAC
GGCCAGTTCG TGCAGGGCGA GCTCTACGTA TTCGCCTACG ACCTCAACGC CGTCATGCTC
GCCCACCCCA AGAACCCGAA GCTGATCGGT CAGAGCCTCA TGGACAAGCC TGACAGCAAA
GGAAAGCTGT TCCGAAAGGA AATCATCGAC AAGGCCAAGA GCGCCGGGAG CGGCTGGGTG
GACTACTTCT ACCTGAATCC CCAGACGGGC AAGGAAGAAG CCAAGACCAC CTATTTGAAG
AAAGCCGGAG ACATGGTGAT CTGCTGCGGC GCGTACAGGT AA
 
Protein sequence
MSKKLLIAVV IVVLGLSWAY AQQQQAVDEK ALAKAMVEKA AAFLNENGKE KTIAEINKPD 
GQFVQGELYV FAYDLNAVML AHPKNPKLIG QSLMDKPDSK GKLFRKEIID KAKSAGSGWV
DYFYLNPQTG KEEAKTTYLK KAGDMVICCG AYR