| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0287 |
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| Symbol | |
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| ID | 4460889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 341876 |
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| End bp | 343729 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639701042 |
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| Product | UbiD family decarboxylase |
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| Protein accession | YP_844423 |
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| Protein GI | 116747736 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.514139 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATGA AGACCGCATT CCGAAACCTG CAAGACTTTA TCGCCGACCT CGAGCGGGCC
GGAGAATTGC TGCGGATCAA GGCCCCGGTC TCGAGCGACC TCGAAATCAC GCAAATCACC
GACCTTGCCT CCAAGAGCCC CGGAGGAGGC AAGGCTCTGC TCTTCGAAAA CGTTGAAGGC
TCGCGCTTTC CGGTCCTGAC CAACGCTTTC GGCAGCGAAC GGCGCATCTG CATGGCGCTG
GGCGTCTCCC ACCTCGACGA GCTCGCCCGC CGCCTCAAGT CCTTCATCGA GATGAAACCG
CCGAAGTCCC TTGCCGATGC GCTCCGGCTG ATCCCGCTCG GGCTGGAGCT CCTCCGCTTC
CTGCCTCGAA AAACCCGCAA GGCGCCGTGC CAGGAGGTTG TCACCACCGG CCGCGACGTG
GACCTGTCCA TGCTGCCGGT GCTCAAGTGC TGGCCATCGG ACGGAGGGCC GTTCGTAACG
CTCCCGGTGG TGATCACGCG CAGCCTCGTC ACCGGCAAGC GCAACGCGGG GATGTACCGG
CTGCAGGTTT ACGACCGCAA GACCACGGGG ATGCACTGGC ACATTCACAA GGACGGGTCC
CACTACTTCC AGGAATTCAG GGAACGGGGC AAGCGCATGC CCGTGGCGGT GGCGATCGGG
ACCGATCCAG CCGTGACTTA CGCCGCCACG GCCCCCCTGC CCCGAGGCAT CGACGAAATG
ATGCTGGCCG GGTTCATCCG GCGAAAGCCC GTGCCGATGG TGCGTTGCCT GACCGTCGAC
CTCGAGGTGC CGGCGGAATC GGAATTCGTG CTGGAAGGTT ACGTGGATCC CGGAGAACTG
CGCGTGGAAG GGCCTTTCGG AGATCACACC GGCTACTATT CGTTGGTGGG GGAATACCCG
GTGTTTCACG TCACCGCCCT GACGCACCGG CGCAATCCGG TGTATTTCGC AACGGTCGTC
GGACGCCCCC CCATGGAAGA TTGTTTTCTT GCCAAGGCCA CCGAGCGTAT CTTCCTGCCG
CTCCTGAACG CCGTATTCCC GGAGATCGGG GACTACTGGA TGCCGTGGGA AGGGGTCTTC
CACAACATCA CGGTCCTGTC CATCCGCAAG GAATATCCGG GCCATGCGCG CCGCATGATG
AGCGCCATCT GGGGGCAGGG ACAGATGAGC TTCTGCAAGG CCGCGGTCCT GGCGGATCCT
TCGGTGGATC TCGGTCACCC CCGGCGGGTG CTCGAACACA TCCTGAACAA CATCGACATC
GAAAGCGACA TCACCCTCTC CGAAGGCATC CTGGACGTCC TCGATCACAG CGCCCCGGAA
CCTTTGTTCG GCAGCAAGAT CGGCATCGAC GCAACCCGGC GGCTTCCCGG CGAAAAGGAG
CGTCCCGCCG CCCGGCCTGT CGGCGCTCTT CCGGACGCGG AGCGGATCGC GTCCGCCCTG
CGGGACGTCT CGGAGTTCCT CGTGGCTTTC CACGTTCCGG ACCTTGAAGT CAGGAACAGG
CTGCTGTGCG TGAATTTCCT CAAAAACGGG TCGGTACCGG CGCAAAGCTT CGCGCAACAA
CTCCTCGATC ACCCGGTCCT GCAGCCGTTT GCGATCTTTC TGCTCTACGA CGCAACCATC
GATTTGCGGG ATGGGTCGCT CATTCTCTGG AAGCTGTTCA ACAATGTGGA CCCGCGAAGA
GATACAGTGC GTTCGGGCGG CAGGATCGTC GTCGACGCGA CGAAAAAGGG GCCCGAAGAC
GGCCATCACC GTCCCTGGCC GGACGATATC GTGATGGATC CCGAAGTGGC GGCAAGGGTG
GCGCGGCGCG CAAAGGAACT CGGGATCGAA GCGTTTCTGC CGGCCGGGAG CTGA
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| Protein sequence | MSMKTAFRNL QDFIADLERA GELLRIKAPV SSDLEITQIT DLASKSPGGG KALLFENVEG
SRFPVLTNAF GSERRICMAL GVSHLDELAR RLKSFIEMKP PKSLADALRL IPLGLELLRF
LPRKTRKAPC QEVVTTGRDV DLSMLPVLKC WPSDGGPFVT LPVVITRSLV TGKRNAGMYR
LQVYDRKTTG MHWHIHKDGS HYFQEFRERG KRMPVAVAIG TDPAVTYAAT APLPRGIDEM
MLAGFIRRKP VPMVRCLTVD LEVPAESEFV LEGYVDPGEL RVEGPFGDHT GYYSLVGEYP
VFHVTALTHR RNPVYFATVV GRPPMEDCFL AKATERIFLP LLNAVFPEIG DYWMPWEGVF
HNITVLSIRK EYPGHARRMM SAIWGQGQMS FCKAAVLADP SVDLGHPRRV LEHILNNIDI
ESDITLSEGI LDVLDHSAPE PLFGSKIGID ATRRLPGEKE RPAARPVGAL PDAERIASAL
RDVSEFLVAF HVPDLEVRNR LLCVNFLKNG SVPAQSFAQQ LLDHPVLQPF AIFLLYDATI
DLRDGSLILW KLFNNVDPRR DTVRSGGRIV VDATKKGPED GHHRPWPDDI VMDPEVAARV
ARRAKELGIE AFLPAGS
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