Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0254 |
Symbol | |
ID | 4461248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 301178 |
End bp | 302302 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639701009 |
Product | hypothetical protein |
Protein accession | YP_844390 |
Protein GI | 116747703 |
COG category | [R] General function prediction only |
COG ID | [COG4671] Predicted glycosyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.965107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCA TGTTCTACAG CCAGCACGTG CTTGGAATCG GGCATTTTTT CAGAAGCATG GAGCTCGCTT CGGCCCTGGC GAACCACGAG GTTCTGTTCG TTGAAGGCGG CGACGCTCTC CCGGGCTACG TCCCGCCGCC TCACGTAAGA AGGTTGCCCC TTCCCGGCCT CATGATGGAC CAGGATTTCA AAGCGATTCA CGCCGTGGAG GGAACGGTCG GGGAAACCCG AGCCAGGCGA AAACAACTTC TGCTGGGCAC TTTCCTGTCT TTTCGACCCG ATGTCCTGAT CACCGAGCTG TTCCCCTTCG GGCGCAAGCA GTTCAGATTC GAGCTGATGC CGCTGCTGGA ATGCATCCGG CAGGAAGGCA TGTCCACCGG GGTGATCTGC AGCCTGCGCG ACATCCTCGT CGAGAAAGCG GACCAGGACG CCTATGAAAA AGGCGTGCTC GAAATCCTGA ACGCTCACTA CCACCACCTG ATGGTTCACT CCGACCCCCG CATCATGAGA CTCGACGAGA CCTTCAGTCG CGTCGATGAA ATTGCGATCC CCATGAGCTA CACGGGATTC ATTGCTCGAA AACCCGGACG ACGGCGACGG CCGCCGAGGA GAAGAACCAT CGTCGTCAGC AGCGGAGGGG GCAAGGTGGG AGTGGATCTC CTCGAGGCGG CCTTGACGGC GTTCCGTTTG CTGCCCGAGC TTGACGCCGG GCTGCGCATG TTTATCGGTC CCTTCATGGA AGCGGCGGAC CGCAACGTCC TGGCAAGCCT GGCAGCCCGC GACTCCAGGA CGAGCATCGA GGAATTCTCG TACGACTTTC TCGACTGCAT GGCTGAATCG AGTCTTTCGA TCAGCATGGC GGGCTACAAC ACATGCATGG ATATCCTGAG CGCGGCCGTG CCCGCTCTCG TCTACCCGTT CCCTCAGAAC AGGGAACAGA TGCTGCGGGC ACGCAAGCTT GAGGAATTGG GCTTTCTCAA GGTGCTGGAC GGGCTCGACC CGCACGGGAT GGCCTCGGCC GCTGCAGCCG CCATGGCTCG CCGTAAGCTC CAGTCCGAAT CCATGCCGCC GGATCTGGCG GGCGCGGCCA ATGCAGCTCT CATAGTTGAA AAATGCCTCG GGTGA
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Protein sequence | MKIMFYSQHV LGIGHFFRSM ELASALANHE VLFVEGGDAL PGYVPPPHVR RLPLPGLMMD QDFKAIHAVE GTVGETRARR KQLLLGTFLS FRPDVLITEL FPFGRKQFRF ELMPLLECIR QEGMSTGVIC SLRDILVEKA DQDAYEKGVL EILNAHYHHL MVHSDPRIMR LDETFSRVDE IAIPMSYTGF IARKPGRRRR PPRRRTIVVS SGGGKVGVDL LEAALTAFRL LPELDAGLRM FIGPFMEAAD RNVLASLAAR DSRTSIEEFS YDFLDCMAES SLSISMAGYN TCMDILSAAV PALVYPFPQN REQMLRARKL EELGFLKVLD GLDPHGMASA AAAAMARRKL QSESMPPDLA GAANAALIVE KCLG
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