Gene Sfum_0254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0254 
Symbol 
ID4461248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp301178 
End bp302302 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content60% 
IMG OID639701009 
Producthypothetical protein 
Protein accessionYP_844390 
Protein GI116747703 
COG category[R] General function prediction only 
COG ID[COG4671] Predicted glycosyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.965107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA TGTTCTACAG CCAGCACGTG CTTGGAATCG GGCATTTTTT CAGAAGCATG 
GAGCTCGCTT CGGCCCTGGC GAACCACGAG GTTCTGTTCG TTGAAGGCGG CGACGCTCTC
CCGGGCTACG TCCCGCCGCC TCACGTAAGA AGGTTGCCCC TTCCCGGCCT CATGATGGAC
CAGGATTTCA AAGCGATTCA CGCCGTGGAG GGAACGGTCG GGGAAACCCG AGCCAGGCGA
AAACAACTTC TGCTGGGCAC TTTCCTGTCT TTTCGACCCG ATGTCCTGAT CACCGAGCTG
TTCCCCTTCG GGCGCAAGCA GTTCAGATTC GAGCTGATGC CGCTGCTGGA ATGCATCCGG
CAGGAAGGCA TGTCCACCGG GGTGATCTGC AGCCTGCGCG ACATCCTCGT CGAGAAAGCG
GACCAGGACG CCTATGAAAA AGGCGTGCTC GAAATCCTGA ACGCTCACTA CCACCACCTG
ATGGTTCACT CCGACCCCCG CATCATGAGA CTCGACGAGA CCTTCAGTCG CGTCGATGAA
ATTGCGATCC CCATGAGCTA CACGGGATTC ATTGCTCGAA AACCCGGACG ACGGCGACGG
CCGCCGAGGA GAAGAACCAT CGTCGTCAGC AGCGGAGGGG GCAAGGTGGG AGTGGATCTC
CTCGAGGCGG CCTTGACGGC GTTCCGTTTG CTGCCCGAGC TTGACGCCGG GCTGCGCATG
TTTATCGGTC CCTTCATGGA AGCGGCGGAC CGCAACGTCC TGGCAAGCCT GGCAGCCCGC
GACTCCAGGA CGAGCATCGA GGAATTCTCG TACGACTTTC TCGACTGCAT GGCTGAATCG
AGTCTTTCGA TCAGCATGGC GGGCTACAAC ACATGCATGG ATATCCTGAG CGCGGCCGTG
CCCGCTCTCG TCTACCCGTT CCCTCAGAAC AGGGAACAGA TGCTGCGGGC ACGCAAGCTT
GAGGAATTGG GCTTTCTCAA GGTGCTGGAC GGGCTCGACC CGCACGGGAT GGCCTCGGCC
GCTGCAGCCG CCATGGCTCG CCGTAAGCTC CAGTCCGAAT CCATGCCGCC GGATCTGGCG
GGCGCGGCCA ATGCAGCTCT CATAGTTGAA AAATGCCTCG GGTGA
 
Protein sequence
MKIMFYSQHV LGIGHFFRSM ELASALANHE VLFVEGGDAL PGYVPPPHVR RLPLPGLMMD 
QDFKAIHAVE GTVGETRARR KQLLLGTFLS FRPDVLITEL FPFGRKQFRF ELMPLLECIR
QEGMSTGVIC SLRDILVEKA DQDAYEKGVL EILNAHYHHL MVHSDPRIMR LDETFSRVDE
IAIPMSYTGF IARKPGRRRR PPRRRTIVVS SGGGKVGVDL LEAALTAFRL LPELDAGLRM
FIGPFMEAAD RNVLASLAAR DSRTSIEEFS YDFLDCMAES SLSISMAGYN TCMDILSAAV
PALVYPFPQN REQMLRARKL EELGFLKVLD GLDPHGMASA AAAAMARRKL QSESMPPDLA
GAANAALIVE KCLG