Gene Sfum_0226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0226 
Symbol 
ID4461302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp267812 
End bp268279 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content58% 
IMG OID639700981 
ProductGreA/GreB family elongation factor 
Protein accessionYP_844362 
Protein GI116747675 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0886527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.144736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAC CCATTACCCG CCTTGGCTAT CATCGCCTCC TGAGGGAACT TTTCTTTCTG 
CGGCACGTGG TTCGCCCTGA GGTGATCGAA GAGCTCCAGG AGGCGCGAAC CGGAGGAATC
AAGATCGAAA ACCAGCAGTA CATGCTGGCC CGCGAACGGC ACATGGTGCT CCAGAAGAAA
ATTCAGGACC TCGAGCGAAA ACTGGCGTCG TGCGAAATCG TCGTGGGCCG CAAGTTCTTT
TTCAAACAGG CCGAGTTCGG GACGATCGTC GTCATTCAGA ACATCGAAAC CGGCGAAACG
CAGCGCTATC AGCTTGTCGG CCCTTACGAA TCCAATGTCG TCGACGGCAA GCTTTCCATC
GACTCGCCCG TCGGGCGTCA TCTTGTGGGG AGGCGGGAAG GGGAGGAAGT GCTCGTCTAC
ACTCCCGCCG GCGTGCGCAT GTACCGCGTG GTGTCCATCA CCCTGTGA
 
Protein sequence
MKVPITRLGY HRLLRELFFL RHVVRPEVIE ELQEARTGGI KIENQQYMLA RERHMVLQKK 
IQDLERKLAS CEIVVGRKFF FKQAEFGTIV VIQNIETGET QRYQLVGPYE SNVVDGKLSI
DSPVGRHLVG RREGEEVLVY TPAGVRMYRV VSITL