| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0224 |
|---|
| Symbol | |
|---|
| ID | 4461300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 266567 |
|---|
| End bp | 267211 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639700979 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_844360 |
|---|
| Protein GI | 116747673 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0587288 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.156271 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTTTT CGAGGATGGA CGAAGAGGAC GACCGCGTCT TTTATGAACG GGACAGGCTG
GTCGCACATC TGGATTCGGT TGCCCTGCGC ACCGTTGAAT CCTTGATCGG GCGGCTCGTC
ACCGGGCCGA AACCCGCGAT TCTGGACCTT ATGGCCAGTT GGGATTCGCA TATTCCCGAC
AGCGTACAGC CCTCCAAGGT CGTCGGTCTC GGCTTGAACC GAAACGAGCT TGCCCACAAC
CGGACCCTTA CGGAATTCAT CCTGCACGAT CTGAACCGGA ACCCGGAACT GCCTTTCGAC
GACGATACGT TCGATGCGGT GATCAACACG GTTTCCGTGG ACTACATGAC CAGACCCTTC
GAGGTATTTG CCCAAGTCGG AAGAATCCTC AAGCGGGGAG GGCTCTTTCT GGTCGTTTTT
TCCAACCGGT TCTTTCCCCA GAAAGCCACG AAGCTGTGGC GGGATTCCAA GGAAGGGGCG
CGGGTGGTTC TCGTCAAGGA TTTCTTTCGG AGCGTGCCGG TCTTCGATTT CCCGGAAGAT
TTCCTGTCCG CGGGCAAGCC GCGCCCCAAG GATGACAAGT ACGCGCACCT GGGCATTCCG
AGCGATCCGA TTTACGCCGT TTATGCCAGG AAAAAAGAAT CCTGA
|
|---|
| Protein sequence | MLFSRMDEED DRVFYERDRL VAHLDSVALR TVESLIGRLV TGPKPAILDL MASWDSHIPD
SVQPSKVVGL GLNRNELAHN RTLTEFILHD LNRNPELPFD DDTFDAVINT VSVDYMTRPF
EVFAQVGRIL KRGGLFLVVF SNRFFPQKAT KLWRDSKEGA RVVLVKDFFR SVPVFDFPED
FLSAGKPRPK DDKYAHLGIP SDPIYAVYAR KKES
|
|---|
| |