| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0180 |
|---|
| Symbol | |
|---|
| ID | 4461652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 216833 |
|---|
| End bp | 217315 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639700935 |
|---|
| Product | UspA domain-containing protein |
|---|
| Protein accession | YP_844317 |
|---|
| Protein GI | 116747630 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.149543 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.974446 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAGG AGTCTTTTTC GAATATTGCG TTTTGTACGG ACTTTTCGGA GAATGCCGAC
TTGTCCTTCG AGACGGCCAG GGACCTGGCA TCCCATTACG GAGCCACGCT CCACATCGTG
CACGTCATGG TGAATTTCTC CCTTGCTCCG CCCATTCATG CCACCTACAT GCCCATCGAG
TACGATCCGA AGTTCGTCGA ACAGGTCACT GAAGCCGCCA GGGGTTCGAT CCAGGAAAGA
TATGTGAGCA AGCTCGCCGG AAGTCAAAGG TTCGATGTGC ACCTGCTCTC CGGTTACGCT
TCCACCGAGA TCATCCGCGT TGCGGAAGAA CGGGATATCG ACCTTATCGT CATGGGTTCT
CACGGCTTGA CGGGTCTGGC CCATGTCCTG TTCGGCAGCA CCGCCGACCG GGTCGTCCGC
CGGGCGCCGT GTTCGGTCCT CACAGTGCGA ATGAAAAAGA AAAAGATGCC GGAAAAGCCT
TGA
|
|---|
| Protein sequence | MSKESFSNIA FCTDFSENAD LSFETARDLA SHYGATLHIV HVMVNFSLAP PIHATYMPIE
YDPKFVEQVT EAARGSIQER YVSKLAGSQR FDVHLLSGYA STEIIRVAEE RDIDLIVMGS
HGLTGLAHVL FGSTADRVVR RAPCSVLTVR MKKKKMPEKP
|
|---|
| |