Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0178 |
Symbol | |
ID | 4461650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 213694 |
End bp | 215004 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639700933 |
Product | cellulose-binding |
Protein accession | YP_844315 |
Protein GI | 116747628 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0617861 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAA AAAGATATGT CTGCTTCTTT CTTGGAATCC TTCTTGGCCT GATCGGTTCG CCCGGGCTTC AGGCCGGGAT GACGCCCGTC TTGGCCATTG ACGGCGACGG GAATTCCTAT GTCGCCGGAT CATCCCTCCT GGGGAGTTCG ACGGATTTCA CTTTGGTCAA GTACAACACC GCAGGGGTCC GGCAGTGGGT GAGGCGCTAC GATGGTCCCG ACGCCGCCGG GGATTGGCTC AAAGCGATCG CCGTAGGCCC CACCGGCGAT ATCTACCTTT TCGGACAGGT GAGGAACACC GGCTACCAGG GCGATTTCGG AACCGTGAAG TACGATCCGG ACGGCCACCT CCTGTGGGCC AGGTTCTATG GGCGACCCAC CAATGACGAA CCTCAGGCCA TGGCGGTGGA CGAGGCGGGG AATGTCTTTG TCACCGGCTC GGTTGAACTG GACTCGGCGA AATGCATTTC AACCGTGAAA TACAAGACCG ACGGCAGCCG TGTCTGGGTC AGGCCATACC GCGGAGTGGC GGGAAGGCAC AATGAGGCGC GGGTCCTCGC CGTGGATGGA GACGGGAATG TTTACGTCGC GGGTCCCTCC CGACCGTCGA GCGGTCCGTA CGACCGGCTT TTGACCCTGA AATACGACTC TGACGGGAAC CTGCTCTGGA GCCGTATCCA CGCGGGGCTG ATCGATCCGC AGGCCATGGC CGTTGACGGC TCCGGCAATG TCTTCATCAC CGGCTCCATC ATACCCTCGG GCGGTTACAA AGACTTCTTC ACAATAAAGT ATGCGGCCAA TGGCGACCGG CTTTGGGTCA GGACGGCCAA CGGGGCTTCG GATCTCGGAG ATGCGGCCTA TGCCCTGGCC GTGGACGGCA GCGGGAACGT CCATGTCACG GGTTATTCCA CCGGCGCCGA CGGTTATGAC TATCTCACCA TAAAATACGA CCCCGCCGGG ACCCGGCTTT GGGTCCAGCG CTACGACGGG GCGGCGGGCG ATACCGATAT GGCCTACAGC GTCGCTTTGG ACCCCGATGG AAATGTCTAC GTCACGGGCA GATCGGATGT CGCCGGCGCT TCCGGGAATT ATCTCACCGT CAAGTACGAC CCCGACGGAA GTCTCCTCTG GACAAGACAG TTCAACGGCG CAACGAACGG GCACGATTTT GCGACGGCGG TGGCTGTACG GGGGGGGGCG CTGTACGTAA CGGGCGAATC GGATGGGGCC AACTCACTGG CCGACTACGT CACGATAAAA TACGATCTGG ACGGCAGACG TCGCTGGGCG CGGCGCTTCG AACGCCAGTA A
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Protein sequence | MKRKRYVCFF LGILLGLIGS PGLQAGMTPV LAIDGDGNSY VAGSSLLGSS TDFTLVKYNT AGVRQWVRRY DGPDAAGDWL KAIAVGPTGD IYLFGQVRNT GYQGDFGTVK YDPDGHLLWA RFYGRPTNDE PQAMAVDEAG NVFVTGSVEL DSAKCISTVK YKTDGSRVWV RPYRGVAGRH NEARVLAVDG DGNVYVAGPS RPSSGPYDRL LTLKYDSDGN LLWSRIHAGL IDPQAMAVDG SGNVFITGSI IPSGGYKDFF TIKYAANGDR LWVRTANGAS DLGDAAYALA VDGSGNVHVT GYSTGADGYD YLTIKYDPAG TRLWVQRYDG AAGDTDMAYS VALDPDGNVY VTGRSDVAGA SGNYLTVKYD PDGSLLWTRQ FNGATNGHDF ATAVAVRGGA LYVTGESDGA NSLADYVTIK YDLDGRRRWA RRFERQ
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