Gene Sfum_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0178 
Symbol 
ID4461650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp213694 
End bp215004 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content61% 
IMG OID639700933 
Productcellulose-binding 
Protein accessionYP_844315 
Protein GI116747628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0617861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAA AAAGATATGT CTGCTTCTTT CTTGGAATCC TTCTTGGCCT GATCGGTTCG 
CCCGGGCTTC AGGCCGGGAT GACGCCCGTC TTGGCCATTG ACGGCGACGG GAATTCCTAT
GTCGCCGGAT CATCCCTCCT GGGGAGTTCG ACGGATTTCA CTTTGGTCAA GTACAACACC
GCAGGGGTCC GGCAGTGGGT GAGGCGCTAC GATGGTCCCG ACGCCGCCGG GGATTGGCTC
AAAGCGATCG CCGTAGGCCC CACCGGCGAT ATCTACCTTT TCGGACAGGT GAGGAACACC
GGCTACCAGG GCGATTTCGG AACCGTGAAG TACGATCCGG ACGGCCACCT CCTGTGGGCC
AGGTTCTATG GGCGACCCAC CAATGACGAA CCTCAGGCCA TGGCGGTGGA CGAGGCGGGG
AATGTCTTTG TCACCGGCTC GGTTGAACTG GACTCGGCGA AATGCATTTC AACCGTGAAA
TACAAGACCG ACGGCAGCCG TGTCTGGGTC AGGCCATACC GCGGAGTGGC GGGAAGGCAC
AATGAGGCGC GGGTCCTCGC CGTGGATGGA GACGGGAATG TTTACGTCGC GGGTCCCTCC
CGACCGTCGA GCGGTCCGTA CGACCGGCTT TTGACCCTGA AATACGACTC TGACGGGAAC
CTGCTCTGGA GCCGTATCCA CGCGGGGCTG ATCGATCCGC AGGCCATGGC CGTTGACGGC
TCCGGCAATG TCTTCATCAC CGGCTCCATC ATACCCTCGG GCGGTTACAA AGACTTCTTC
ACAATAAAGT ATGCGGCCAA TGGCGACCGG CTTTGGGTCA GGACGGCCAA CGGGGCTTCG
GATCTCGGAG ATGCGGCCTA TGCCCTGGCC GTGGACGGCA GCGGGAACGT CCATGTCACG
GGTTATTCCA CCGGCGCCGA CGGTTATGAC TATCTCACCA TAAAATACGA CCCCGCCGGG
ACCCGGCTTT GGGTCCAGCG CTACGACGGG GCGGCGGGCG ATACCGATAT GGCCTACAGC
GTCGCTTTGG ACCCCGATGG AAATGTCTAC GTCACGGGCA GATCGGATGT CGCCGGCGCT
TCCGGGAATT ATCTCACCGT CAAGTACGAC CCCGACGGAA GTCTCCTCTG GACAAGACAG
TTCAACGGCG CAACGAACGG GCACGATTTT GCGACGGCGG TGGCTGTACG GGGGGGGGCG
CTGTACGTAA CGGGCGAATC GGATGGGGCC AACTCACTGG CCGACTACGT CACGATAAAA
TACGATCTGG ACGGCAGACG TCGCTGGGCG CGGCGCTTCG AACGCCAGTA A
 
Protein sequence
MKRKRYVCFF LGILLGLIGS PGLQAGMTPV LAIDGDGNSY VAGSSLLGSS TDFTLVKYNT 
AGVRQWVRRY DGPDAAGDWL KAIAVGPTGD IYLFGQVRNT GYQGDFGTVK YDPDGHLLWA
RFYGRPTNDE PQAMAVDEAG NVFVTGSVEL DSAKCISTVK YKTDGSRVWV RPYRGVAGRH
NEARVLAVDG DGNVYVAGPS RPSSGPYDRL LTLKYDSDGN LLWSRIHAGL IDPQAMAVDG
SGNVFITGSI IPSGGYKDFF TIKYAANGDR LWVRTANGAS DLGDAAYALA VDGSGNVHVT
GYSTGADGYD YLTIKYDPAG TRLWVQRYDG AAGDTDMAYS VALDPDGNVY VTGRSDVAGA
SGNYLTVKYD PDGSLLWTRQ FNGATNGHDF ATAVAVRGGA LYVTGESDGA NSLADYVTIK
YDLDGRRRWA RRFERQ