Gene Sfum_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0175 
Symbol 
ID4461647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp211739 
End bp212182 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content55% 
IMG OID639700930 
Productcalcium-binding EF-hand-containing protein 
Protein accessionYP_844312 
Protein GI116747625 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.288154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.986059 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCAT ATGTACACCG ATTTGCGGTC TCGGTCCTGG TCGTGTTGTG TCTTTCCGGT 
TGTGCCTTCA CGGAATCTCA AGCTCAAACC GCAGGCCTTT TCGAAACGCT CGATGTGAAC
CGGGACGGTC AGGTCACGCG CAATGAATTC TCTCAGGGTA TGAAGCTGAG GGTTTTCAAG
GCAATCGACC GGAACGCCGA CGGACAGATC ACCTGGGAGG AATGGCAAAA AGTGGATACC
AGCCCGAAGG CCAGGGAGCA CTTCGACGCC ATGGATACGA AGAAGACGGG CAAGGTCACC
TACGAGGACT TCCTCCAGGC GTCCGGCGCC TACATGGATA TCGACGACGT ATATATATCG
CTCGACACCA GCCGTGACGG CCTGTTGTCC AGGGGAGAAA CCACCGGCTT CAAGGGCGTC
AGGCTTTTCA CCGTTCGATT CTAG
 
Protein sequence
MRSYVHRFAV SVLVVLCLSG CAFTESQAQT AGLFETLDVN RDGQVTRNEF SQGMKLRVFK 
AIDRNADGQI TWEEWQKVDT SPKAREHFDA MDTKKTGKVT YEDFLQASGA YMDIDDVYIS
LDTSRDGLLS RGETTGFKGV RLFTVRF