Gene Sfum_0145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0145 
Symbol 
ID4461512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp177260 
End bp178372 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content65% 
IMG OID639700900 
Producthypothetical protein 
Protein accessionYP_844282 
Protein GI116747595 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.92086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTTA CGATGGTGAG CACATCCTAT CCCTTCGATC CTGAAGACTG GCGCGGACGA 
TTCATCAAGG AAATGGTTTA CGCCCTGGCC GAAGATCGGG CCGTCGAGCT CTCCCTTTGG
GCGCCGCCCG GGAAAATCCC CGACAACGTC GCCTACCGGC CGACAGCTGC TGAAGCCGCA
TGGCTCAAAG ACTTGCTCGC CCGGGGAGGA ATCGCCCACC TGATTCGCTC GCGAACCCCG
CGCGGCTTCG AGGCGGTTTT CAAGCTGCTG TGGCTCCTGC GGAGGAACTG CCTGCGGAAA
CCCGAGGCGG ACGTGGCCCA CGTCAACTGG CTGCAAAACG TCCTGCCATT TTGGGGCACC
TCCATTCCGG CCGTCGTGAG CGTGCTCGGC ACCGACTTCG GATTGTTGCG CGTGCCCGGA
GTCACCGGCC TGATCAGGAC GGTGCTCCGG CAGAGGGAAT GCCTCATCGC TCCCAATGCC
GACTGGATGG TTCCGGAGTT GGAAAAGCGC TTCGGCGACG TGGCACGGGT CCGCGCGATT
CCGTTCGGGG TGGACGACAG GTGGTTTTCG GTCAAGCCGA TAAGAACGCC GGGGGCACCG
AGGCAATGGC TGGTCGTGTC ACGGGTGACC GAAAAGAAGA TCGGCCCCTT GTTCTCGTGG
GGAGAAGGGC TTTTCGGCAC CGACGACGAG CTGCACCTGC TCGGTCCCAT GCAGGAGGAC
CTTTCCATCC CGGGTTGGGT GCGCTACCAC GGCCCGACCC ATCCGGATGC GCTGGAAAGC
GAGTGGTTCC CCCGCGCGGC CGGGTTGATT TCCGTGAGCC GGCACGACGA AGGGAGGCCG
CAGGTCATTC TCGAAGCCAT GGCGGCGAGG CTGCCCATTC TCGCATCCGC CATTCCCGCG
CACCGCAACG TCGTCCGGCA CATGGAAACG GGTTGGCTCG CGAGCTCGAG GGAGGAATTC
GCCGGCGGCC TCGAATGGCT CGCTCGGCCG GACCACAACG AAGCCGCCGG TGCGAGCGCC
CATGACTGGG TCAGGCGGGA AATCGGAACA TGGCGGGATT GCGCCGACCG ATACAAGACG
GCATACCGGA TGGTGACGGG GGTGGAGGGT TGA
 
Protein sequence
MRVTMVSTSY PFDPEDWRGR FIKEMVYALA EDRAVELSLW APPGKIPDNV AYRPTAAEAA 
WLKDLLARGG IAHLIRSRTP RGFEAVFKLL WLLRRNCLRK PEADVAHVNW LQNVLPFWGT
SIPAVVSVLG TDFGLLRVPG VTGLIRTVLR QRECLIAPNA DWMVPELEKR FGDVARVRAI
PFGVDDRWFS VKPIRTPGAP RQWLVVSRVT EKKIGPLFSW GEGLFGTDDE LHLLGPMQED
LSIPGWVRYH GPTHPDALES EWFPRAAGLI SVSRHDEGRP QVILEAMAAR LPILASAIPA
HRNVVRHMET GWLASSREEF AGGLEWLARP DHNEAAGASA HDWVRREIGT WRDCADRYKT
AYRMVTGVEG