Gene Sfum_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0141 
Symbol 
ID4461508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp172461 
End bp172886 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content57% 
IMG OID639700896 
ProductGtrA family protein 
Protein accessionYP_844278 
Protein GI116747591 
COG category[S] Function unknown 
COG ID[COG2246] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCG TGGCCTTTAG GCTGAAGAAC GAATTTTGTT CGAGACAGTT CGCGGGTTTT 
CTCGTGGTGG GAGGTTCCGC GGCGATCCTG AATTTTTTCT GCCGGGTGTT CCTGAGCGGG
TATTTGTCCT ATGCCGCTGC GATCGTGGTT GCGTACCTGA TCGCCATGGT GTTCGCGTTC
GTGCTGGGAA AATGCTTCGT GTTTCAGTCC CGGAGGAGTT CGCGCACGGC ACGGGAATTC
ATCAATTTCG GCCTGGTGAA CGGTCTCGCC GTTCTACAGA CGCTGGGAAT CAGTCTCCTC
CTGGCCTATG TGGTCCTGCC GTATTGCGGG GTTTCGAGCC ACGGGGAGGA GATTGCCCAT
GCCGTCGGGA TCATGGTGCC CGCCTTCACC AGTTATGTGG GACACAAGCA CTTCACGTTC
AAGTGA
 
Protein sequence
MNGVAFRLKN EFCSRQFAGF LVVGGSAAIL NFFCRVFLSG YLSYAAAIVV AYLIAMVFAF 
VLGKCFVFQS RRSSRTAREF INFGLVNGLA VLQTLGISLL LAYVVLPYCG VSSHGEEIAH
AVGIMVPAFT SYVGHKHFTF K