Gene Sfum_0139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0139 
Symbol 
ID4461506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp170642 
End bp171004 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content39% 
IMG OID639700894 
ProductNAD dependent epimerase/dehydratase/dehydrogenase 
Protein accessionYP_844276 
Protein GI116747589 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.656323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTATTCGA TCGACTTCTG CAGGATCATC GAGTATTGCC TGGTGCATAA GCCTTCAGGG 
AAGACGTATG ACATTGTCGG AGAGGAACAG ATTTACTATA TCGACATGAT CCGATCCATA
AAGAAGCACA AGCGACTCAA TACGATTATA CTGAACATTC CATACGTATT GTTTTCAAAA
CTTCTAAAGT TGTATTCGCT CATCAGCAGC GATCCTCCAT TTACCGCAGA TCAGCTTAAG
GCACTGACGG CAGGCGATAT GTTTCATGGA GTTGACATAA GAAAAGAGTT CGGATTTGAT
CAAACTAAAT TTGATGATGC TATGTATATG ACTTTTCAAA AAAATCATCA TGATTGTGGT
TAG
 
Protein sequence
MYSIDFCRII EYCLVHKPSG KTYDIVGEEQ IYYIDMIRSI KKHKRLNTII LNIPYVLFSK 
LLKLYSLISS DPPFTADQLK ALTAGDMFHG VDIRKEFGFD QTKFDDAMYM TFQKNHHDCG