Gene Sfum_0134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0134 
Symbol 
ID4461501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp167066 
End bp167608 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content35% 
IMG OID639700890 
ProductUbiA prenyltransferase 
Protein accessionYP_844272 
Protein GI116747585 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00304633 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.917223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTGATTT ATATGGTACT TAACATTTTG TATTCTACAA AGTTGAAGGA AATTCCTATT 
ATAGATGTTT TGTGTGTTTC GGCAGGATTC GTATTGCGTA TCCTGGTTGG GGCGTATGCC
GTATCTGTGC TCCCAAATCA TTGGATTATT TTGATGACTT TTCTACTGGC ACTCTTTCTT
TCATTTGCAA AAAGAAGAGA TGATATTGTA TTAAGTGGAA ATAATAATAA TGGATTGATA
AGGTGCGTTA TTGTTGGTTA TAGTCTTGAA TTTGTATCAA CGATAATGTC AGTTCTTGCA
TCAGTTGTAA TTATTTGTTA CATTCTATTT ACACTGTCGC CAGAGACTGT TGCCAAGCAC
GGTACCCATA ATTTATATAG TTCTTCTTTC TGGGTAATAA TGGGAATTAT AAGATACATG
CAACTCACTT TCGTTTATCA AAGGAGCGGT TCTCCATCCA GGATACTCAT TGAGGATATA
CCTTTGAAGA TTATCACGGT TTTGTGGGTT GTCCACATTA TTTTCATACT TTATGTCAAG
TAA
 
Protein sequence
MLIYMVLNIL YSTKLKEIPI IDVLCVSAGF VLRILVGAYA VSVLPNHWII LMTFLLALFL 
SFAKRRDDIV LSGNNNNGLI RCVIVGYSLE FVSTIMSVLA SVVIICYILF TLSPETVAKH
GTHNLYSSSF WVIMGIIRYM QLTFVYQRSG SPSRILIEDI PLKIITVLWV VHIIFILYVK