| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0039 |
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| Symbol | |
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| ID | 4460979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 53803 |
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| End bp | 54669 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639700791 |
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| Product | ABC transporter, periplasmic substrate-binding protein, putative |
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| Protein accession | YP_844177 |
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| Protein GI | 116747490 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2998] ABC-type tungstate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000295564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.292337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTC TTTTCTTCAA AGCGGCGGTG TTCTCGATCT GCCTGGCGAT TGCGGGCACG
GGTGCGGTGC CTAGCGCCGG CGGCGAGCCG TGCGACGGCA CCTATGGCTC CGGTCCGAAC
CGGTTTGTGC TGGCAACCGG AAGCCCGGGG GAGCTCGGAT TGGTCAAGGC ATTGGCCGAC
GTGTTCACCG CACGGACCAA CACCACTCTG TGCTGGAAGA AGGCCGGATC GGGCGAATCC
CTGAAAATGC TGAAGGAAAA GACAGCCGAC GTGATCATGG GACACAGCCC CGACGCCGAA
AAAAAAGCGG TGGCGGAAGG CTGGGCCGCA AACCACACGC TTATCGGCTC GAATGAGTTC
TTCATCGTCG GACCTGCAAC GGACCCCGCG GGTATCGCGA ACACTTCGTC AGCCGTCGAG
GCCTATCGGA AAATTGCGGA AACCAAGGCA AAGTTTTTTT CACGGGGAGA CAATTCCGGC
ACGCACAAGA AGGAACTCCA GATTTGGGCC AAGGCGGGAG TCACCCCATC CGGAGACTGG
TACGTCGTGA CGAAGCAGTT CATGATCGCA ACGCTCAGGA TGGCGGATAG CGAGCGGGGC
TATTTCATGA CGGACAGCAG CACCTGGGTA GCCGAAAAGA AGAACCTGAA GAATCTGAAA
GTGCTTCTTA AGGGGGACAA GATCCTGGTC AACGTCTACC ACGGGTTGTG CCAACCGCCG
GGGAGCACAC CGGGCGCCGA ATGGGCGGCC AAATTCATCG CTTTCGTCGC GTCCGATGAA
GGACAGAACA TCATCCGCGG CTTTGGAAAA GACCTGCACG GAGAGGGTCT CTACAACGAC
GCCGCATACG CGAAGCAATT CGAATAG
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| Protein sequence | MKALFFKAAV FSICLAIAGT GAVPSAGGEP CDGTYGSGPN RFVLATGSPG ELGLVKALAD
VFTARTNTTL CWKKAGSGES LKMLKEKTAD VIMGHSPDAE KKAVAEGWAA NHTLIGSNEF
FIVGPATDPA GIANTSSAVE AYRKIAETKA KFFSRGDNSG THKKELQIWA KAGVTPSGDW
YVVTKQFMIA TLRMADSERG YFMTDSSTWV AEKKNLKNLK VLLKGDKILV NVYHGLCQPP
GSTPGAEWAA KFIAFVASDE GQNIIRGFGK DLHGEGLYND AAYAKQFE
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