Gene Mthe_1618 details

Gene Information

• Locus tag: Mthe_1618
• Symbol: rps13p
• ID: 4462195
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosaeta thermophila PT
• Kingdom: Archaea
• Replicon accession: NC_008553
• Strand: +
• Start bp: 1762060
• End bp: 1762539
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 639700636
• Product: 30S ribosomal protein S13P
• Protein accession: YP_844025
• Protein GI: 116754907
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0099] Ribosomal protein S13
• TIGRFAM ID: [TIGR03629] archaeal ribosomal protein S13P

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.583874
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGACGA AGGAGACTGA GAGCTCTGTT GAGCTGAGAC ATATAGTGCG CATTTACAAC 
ACCGATCTTG ACGGGAAGAA GCAGGTTCAG ATGGCTCTTA CTGGCATCAA AGGCGTTGGC 
AGAAGGCTGG CCAGGGTGTT CGCAGTGAAG GCAGGCGTGG ATCCCTGCGC GACTCTGGGG 
AAGCTGCCTG AGGAGCAGAT AGAGGCTCTG AAGAATGTTA TAGAGAGTGT CAGAGATAAC 
ATTCCAGCCT GGATGATGAA CCGGAGGAAG GACATAATAA CAGGCGTGGA CAAACACGTC 
ATGGGCGCCG AAGTCCTCAC GACCCTCCGC GAGGATCTTG ACATCATGAA GAAGACCAGA 
AGCTACAAGG GCATAAGGCA TGAGCTCGGG TTGAGAGTGA GAGGGCAGAG GACCAGATCC 
ACAGGCAGGA GCGGCGCGAC CGTTGGTGTC ACCAGGAAGA AGACGCAGGC GAAGAAATGA 

 

Protein sequence

METKETESSV ELRHIVRIYN TDLDGKKQVQ MALTGIKGVG RRLARVFAVK AGVDPCATLG 
KLPEEQIEAL KNVIESVRDN IPAWMMNRRK DIITGVDKHV MGAEVLTTLR EDLDIMKKTR 
SYKGIRHELG LRVRGQRTRS TGRSGATVGV TRKKTQAKK