| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1560 |
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| Symbol | |
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| ID | 4461852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | + |
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| Start bp | 1695658 |
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| End bp | 1695924 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639700581 |
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| Product | CRISPR-associated Cas2 family protein |
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| Protein accession | YP_843970 |
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| Protein GI | 116754852 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1343] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR01573] CRISPR-associated endoribonuclease Cas2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGGCTGG CTGTTACTTA CGATATCAGC GATAATCGTA TACGTACCAG GGTGTTCAGG
ATACTTGAAA GTTATGGTGC CTGGAAGCAG TACAGTGTCT TCGAGCTCGA GATCAGCGAT
GTTCAGCGCC TTGAGATGGA AGCCAAGATC AAATCAGTGA TCAAACCAGG GGACAAGGTA
CGCATATATG AGCTGTGCGA ACGCTGTGTT GGTGCCATAG TCGAGATCGG CGAGAAATCC
CCTACAAGAA AATCGAACGT GATTTGA
|
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| Protein sequence | MRLAVTYDIS DNRIRTRVFR ILESYGAWKQ YSVFELEISD VQRLEMEAKI KSVIKPGDKV
RIYELCERCV GAIVEIGEKS PTRKSNVI
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