| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1557 |
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| Symbol | |
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| ID | 4462537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | + |
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| Start bp | 1692023 |
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| End bp | 1694113 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639700578 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_843967 |
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| Protein GI | 116754849 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | [TIGR03158] CRISPR-associated helicase, Cyano-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.476169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGGTG AGGAGAGATC CAGTTATATC ATAGATCTAG ATGGTTTGCG CCTGGCTCGG
ACGGGTTCCA GCTATCTGAG CGGCATGAAG CCTTTTATGC ATCAGGTGGA GAGCGAGAGG
CTGATAAAAG AGGAGGACAT GCTGTTTCTC TTCAATCACA GCCCCACAGG TTCAGGAAAG
ACGGTATCGT GGTTGAAACC TGTCCTGGAT TCGAGGATGA AGGCAATCGC TGTTTATCCC
ACGAATGCGC TGGTGATGGA TCAGAGCATG CAGATCAGGC GGATGATCGA GAGATACTAT
GATCCTGAAG ATTACCACGT GCAGGCAGTC ACCAGCGATC TTCTGGCTGA TGAGAGAAAG
CTGTATCCGG ATGAGAGCGG TCTTCGAAAG GGGCAGCTTC TCAATCGTAT AATCAGAAAG
GGGCGTGGGC GGGGGCTCGT ACTACTGACA AATCCGGACA TACTCACACT CGCGCTCAAG
GACGCATACT ATGATAATGA TTTACGTGAG TCGATCCGAA GCGTCGATAT TCTGGTGGTG
GACGAGTTCC ATCTTGCCTC AGTGAAGCAG AGCGATATGC TTCTCTTCAT GGCTCACGAG
ATCTGCGACG ATAGAAGGAG CAGTCTAAGG AAATTCGTGT TTCTCAGCGC CACTCCGAAT
CAGAAGATAA TTCAGAGGGC AAAGCAGGCT GGATTGAAGG TCGATATTCT GAAGGACATG
AGCACACCCC TCTCATGTTC TTCAGGCCAT CCCGTTCTTC CAAAGATCAG GCTCGAGCTC
CGATGCGGTG GGATATTCAG GACATACGAG CTCATCAAAG AGGATATCGA CTACTTTGTT
GATTTCTGTC AGAGGCCGAT GGATGATGGG AGAAGGGCGA GGACGGTCTT CATACTTGAT
GGTATCTACG AGGTGGATGA GATTTTCAGC GTTCTGAGGG ACCGGCTGCA GGATTTTGTT
GTGGAGAGAA TCGATGGGCT TCACCCTCCA ACCCCTGAGA AGCTGGAGAG GTTTGATGTG
CTGGTCTCGA ACTCCTCAGT AGAGGTGGGC ATAGATTTCG ATGTGGACAG ACTCGTCTTC
TCCGGATACA CAAAGAGCCA GATGATTCAG AGAATAGGTC GCCTCAGGAA CAAACCCGAG
AGCGCGGTCT GCGAGGCAAT CTGCTTCGTT CCGCATGCGT TTTACGATCA CCTGAAAGGC
AGAAGGTCTC TTACAAGGGA GGAGCTCGTA AAAGAGGCCG GGAAGGTGAT CGATTCCAGC
CTGGATCTCT CATCTTACTC AAAGATATAC TCGCCGCTGG AGGCGTTTCT CTATCTCAGT
GCCAGGATCG ACGGCAATAC GTGGAGGGAC TATCTCGGCG AGGAGCATCA TGCCAAGGGT
ATGCCAGATG CGATTCGGGG CGATGAGTGG ATACGGACTC TGCGCATAAT GGAGATGCAT
TTTCTTGATG GCGAGATCGA TTGTGAGACG TTCGAGATGC TCAGGAGCGA GTCGGAGGGC
CTCAAGGAGG GGCTGCTGAG CTATCGCGGA TCGCGCTTCC AGGCGCTGCT GTTCGATGTC
TCCGATAAGC AGCTGAAGCT CTACGACCTC ATGTATCTCC TAAGGCGAGG TGATGTGGAG
TTCCTGACAC CACATCGCTT TGTTGCGAAA CTCAGGTCGC TGTACGGAGA TGAATACGAG
TTTGGCGTCA GAGAGAAATA CGAATCGATG AAGCGGTTTG CTGCAGGTTT TTGTTGGTAC
AGGGGAACGA TAGACGGCAC CAGAAAAGTC ATCTTTAAAG GATCCGGTAA CGCTCATTAT
AAAGACATCA TGTTCAGCAC TCCAGAGCAT CTCAGAAAAC CACGGCTGGT ATCTGGATTC
AAGGCTGAGG TCGAGCCGGG CATCCCGTCT ATCGCATATC TCAATAACAC ACTGGGAGAG
TACAGAATCT TCGCCCGACT GATCAATCAG AGCACTTCGT ATCTCAAGGC AAAGTTCAAT
CTCGGGGATT TCTTCTACCT CTATCCATAC TCGGGAGGGA GAAGCGTGGC ATTCGGCCAC
GACGCCCTGT ACATAGACTG TCTTCTGAGA GAAGAGCATG CAGGAAGATG A
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| Protein sequence | MSGEERSSYI IDLDGLRLAR TGSSYLSGMK PFMHQVESER LIKEEDMLFL FNHSPTGSGK
TVSWLKPVLD SRMKAIAVYP TNALVMDQSM QIRRMIERYY DPEDYHVQAV TSDLLADERK
LYPDESGLRK GQLLNRIIRK GRGRGLVLLT NPDILTLALK DAYYDNDLRE SIRSVDILVV
DEFHLASVKQ SDMLLFMAHE ICDDRRSSLR KFVFLSATPN QKIIQRAKQA GLKVDILKDM
STPLSCSSGH PVLPKIRLEL RCGGIFRTYE LIKEDIDYFV DFCQRPMDDG RRARTVFILD
GIYEVDEIFS VLRDRLQDFV VERIDGLHPP TPEKLERFDV LVSNSSVEVG IDFDVDRLVF
SGYTKSQMIQ RIGRLRNKPE SAVCEAICFV PHAFYDHLKG RRSLTREELV KEAGKVIDSS
LDLSSYSKIY SPLEAFLYLS ARIDGNTWRD YLGEEHHAKG MPDAIRGDEW IRTLRIMEMH
FLDGEIDCET FEMLRSESEG LKEGLLSYRG SRFQALLFDV SDKQLKLYDL MYLLRRGDVE
FLTPHRFVAK LRSLYGDEYE FGVREKYESM KRFAAGFCWY RGTIDGTRKV IFKGSGNAHY
KDIMFSTPEH LRKPRLVSGF KAEVEPGIPS IAYLNNTLGE YRIFARLINQ STSYLKAKFN
LGDFFYLYPY SGGRSVAFGH DALYIDCLLR EEHAGR
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