| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1533 |
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| Symbol | aksA |
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| ID | 4461720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | + |
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| Start bp | 1660269 |
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| End bp | 1661450 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639700556 |
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| Product | trans-homoaconitate synthase |
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| Protein accession | YP_843945 |
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| Protein GI | 116754827 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.200545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACT TCTCCGTCAA TCAGTTTCTT GAGATGGCCG GCACCCCTCC TCTGGATATA
GAGATATGCG ATGTAACGCT TAGGGACGGC GAGCAGATGC CGGGGGTTGT GTTCAAGCCC
GAGGAGAAGC TTGAGATCGC TAGGAGGCTC GACGAGATCG GCGTCGAGAT CATAGAGGCC
GGATTTCCAG TTGTATCAAA GAGCGAAAAG AACGCGGTGA GAGATATCTG CAATCTCGGC
CTGAATGCGA AGATATCCGC TCTCTCCAGG TCCAGGCAGT CTGATGTCGA TGTGGCGATC
GATTGCGGTG TTGATATGGT GAGCGTATTC ATAGCGACCT CAGATCTCCA TCTGAAATAC
AAGCTGCATA TGACATGCGC AGAGGCGATA AGGTGTGCGC TGGAGACTGT TGAGTATGCA
AAGGAGCATG GTCTCATAGT CAGGTTCTCG GCTGAGGATG CGACGCGAAC GGATTTCAAC
ACGCTCAAGA AGCTCTACAA AAAAGCAGAG GAGTACCACG CAGATTACGT GAGCGTGGCC
GACACAGTCG GCATAATGAA CCCGAGGACG ATGTACTACA TGATCAGCGA GATCAAGAAG
ATTGTGAACA TTCCGATATG TGTTCACTGT CACGATGATC TCGGTCTCGC GCTGGCGAAC
ACCCTTGCCG GAGCAGAGGC GGGCGCGAAG CAGCTCCACA CCACCGTCAA CGGCATCGGC
GAGAGGAGCG GAAACACGCC GCTTGAGGAG CTGCTGGTCA ACCTTCGCCT ACACTACGGC
ATAGATCGCT ACGATCTGAG CAAACTCAAG TCGATCTCCT CTCTGGTGGA GAGATATTCG
GGCGTACCTG TTGCAAAGAA CAAGGCTGTT GTTGGAGATA ATGCCTTTGC GCACGAATCC
GGGATCCATG TCGCCGCGGT CCTCGAGGAG CCCAGGACCT ATGAGCTCTA CTCCCCTGAG
ATGGTGGGGG CTGAGAGGAG GATCATCATC GGGAAGCACA CAGGAGCCAA GGCGCTCAAG
TACATCACGA AGAAGATGGG CTATGACCTG GAGAAAAAGG ATCTCTGCCT CCTTGCTGAG
AAGGTGAAGA CCGCGAGCGA GTTCAAGAGA CCGATAACAT GCGATGAGTT GAGAAGACTG
ATCCTCGATC TCAAAATAGA GTTTGTGTAC AACGGTCCGT AG
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| Protein sequence | MSDFSVNQFL EMAGTPPLDI EICDVTLRDG EQMPGVVFKP EEKLEIARRL DEIGVEIIEA
GFPVVSKSEK NAVRDICNLG LNAKISALSR SRQSDVDVAI DCGVDMVSVF IATSDLHLKY
KLHMTCAEAI RCALETVEYA KEHGLIVRFS AEDATRTDFN TLKKLYKKAE EYHADYVSVA
DTVGIMNPRT MYYMISEIKK IVNIPICVHC HDDLGLALAN TLAGAEAGAK QLHTTVNGIG
ERSGNTPLEE LLVNLRLHYG IDRYDLSKLK SISSLVERYS GVPVAKNKAV VGDNAFAHES
GIHVAAVLEE PRTYELYSPE MVGAERRIII GKHTGAKALK YITKKMGYDL EKKDLCLLAE
KVKTASEFKR PITCDELRRL ILDLKIEFVY NGP
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