| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1501 |
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| Symbol | |
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| ID | 4462223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | + |
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| Start bp | 1627844 |
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| End bp | 1628653 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639700524 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_843913 |
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| Protein GI | 116754795 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGGTGT ATGCTGTTCT CGGAGATCCG ATAGAGCACA GCCTCTCGCC TGTGATGCAT
AACGCCGCCT TCCAGGCCAT GGGGCTTCAG GCGAGCTACC ATGCGTTCAG GGTTAAAATA
CCAAGGCTGA GGGACGCTAT TCTTGGCGCT GATGCCATGG GCTTTGGGGG ACTCAACCTG
ACGATACCCT TGAAGGAGAG CGCGATATCG GTGGTCGAGC CGGACGAGAC TGCGGAGGCT
ATCGGAGCTG CTAACACAGT ATCATTCCAA AGAGGGATCC GGGGGCACAA CACCGATGGG
ATCGGCGCGT CACTTGCCCT GAGGCATTAC GGCGTGAATG TCAGAGGCGC TGATGTTCTT
CTGATCGGCG CAGGAGGCGC TGCCAGAGCC ATCGCATACC AGCTCTCCAA AGATGGCGCA
GAGATCGTTG TAACGAACAG GACACCTGAG AGGGGGCTGG CGCTCGCGAG TGATCTCGGC
CTGGAGTTCC GCCCGTTCGG GGAGATCGAT GATCTCGTCA GAGTCTCTGA TGTAGTGATA
AACGCAACAT CTGTGGGAAT GCGTGATGGA GATCCCAGGC TCTTTGATGG GAGTATCCTG
AAAGCAGAGC AGGTTGTATT CGATATAATC TACAGCAGGG AGACCGAGCT TCTCAGGGAT
GCGAGGAGAG CAGGAGCGAA GGCTATCGAT GGGGTCATGA TGCTTGTCTA TCAGGGTGCT
GCAGCCTTCA GGATCTGGAC CGGTCTGGAT GAGCCAGTCG ACGTGATGGA GGCCGCGGTC
AGGGCAGCGC TCGGGCGGCT GAATCTGTAG
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| Protein sequence | MKVYAVLGDP IEHSLSPVMH NAAFQAMGLQ ASYHAFRVKI PRLRDAILGA DAMGFGGLNL
TIPLKESAIS VVEPDETAEA IGAANTVSFQ RGIRGHNTDG IGASLALRHY GVNVRGADVL
LIGAGGAARA IAYQLSKDGA EIVVTNRTPE RGLALASDLG LEFRPFGEID DLVRVSDVVI
NATSVGMRDG DPRLFDGSIL KAEQVVFDII YSRETELLRD ARRAGAKAID GVMMLVYQGA
AAFRIWTGLD EPVDVMEAAV RAALGRLNL
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