| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1448 |
|---|
| Symbol | |
|---|
| ID | 4461902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 1548513 |
|---|
| End bp | 1549025 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639700467 |
|---|
| Product | nitroreductase |
|---|
| Protein accession | YP_843862 |
|---|
| Protein GI | 116754744 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGTGA TCGAGGCCAT AAGAAAGAGA AGGAGCATAA GGAAGTATCA GGAGAGGCCT
GTAGAGGAGG AGAAGCTCAA TCGTATACTT GAGGCTGGAA GGCTCGCTCC ATCTGCAAAG
AACCTCCAGG ACTGGAAGTT CGTAGTTGTG AGAGACAAAG AGAGGCGCAA GAGGCTCGCT
GAAGCTGCAA AGAACCAGTG GTTCATCGCA GAGGCGCCTG TGGTCATAGT GGCCTGTGGG
ACAGAGACTA AATATGTGAT GACATGCGGT CAGCACACAT ACACCATAGA TGTGTCGATA
GCGGTCGACC ACATGACATT GGAGGCGACC GAGCTCGGTC TCGGGACATG CTGGATCGGC
GCCTTCTACG AGGACAGGGT CAAGAAGATT CTGGATGTCC CGGAGAACAT TCGCGTTGTC
GCGCTTCTCC CCCTCGGATA CCCTGCGGAG GATCCCGAGC CCAGGCCGAG AAAACCTGTT
GAGGAGATCG TCTGCTACGA GAGATGGTGC TGA
|
|---|
| Protein sequence | MDVIEAIRKR RSIRKYQERP VEEEKLNRIL EAGRLAPSAK NLQDWKFVVV RDKERRKRLA
EAAKNQWFIA EAPVVIVACG TETKYVMTCG QHTYTIDVSI AVDHMTLEAT ELGLGTCWIG
AFYEDRVKKI LDVPENIRVV ALLPLGYPAE DPEPRPRKPV EEIVCYERWC
|
|---|
| |