| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1444 |
|---|
| Symbol | |
|---|
| ID | 4461898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 1543560 |
|---|
| End bp | 1544558 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639700463 |
|---|
| Product | nucleic acid binding, OB-fold, tRNA/helicase-type |
|---|
| Protein accession | YP_843858 |
|---|
| Protein GI | 116754740 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3390] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGTACT CCAGAGAGGT TGCCAGAAGG GTATTTCTGG AGGAGCTCAG AAGATCTGAT
CTCTCTTTCC GAGAAGGAGA TGACTCGCAG TATGCACCGC AGTATCTCCT GACGCCGACA
GGCGCCAGAT GCAATCGGGT TTTTGTCGTT GGGACGCTGA TAGACAGGGA TGACATCGGC
GAGGAGGTCG AGTACTGGCG CGGGAGGCTG GCGGATCCGA CTGGCAGTAT TCTGATCTAC
GCAGGACAGT ACCAGCCAGA GGCGTCGAGG GTGCTTGCTG AGATTGAGAT CCCAGCATTC
GTGGCTGTCG TCGGCAAACC CTCAGTCTAT GAGACTGAGG ACGGGAAGAA GATCACATCG
ATAAGGGCAG AGGCCATACA GAAGGTGGAT CTCGACACAC GTAACAAGTG GATAATGGAG
GCAGCGCGCC GGACGCTCGA GAGGCTGGAG CTCATGCGCA GCATCGATGT ACCACATAAC
ACAGACTTCC AGCCCGGAAC CATGTACCAC CCTGAGGCAA CCACACTCGA GGACTGCAAA
AAGGCCATGG GCCACTACTC CACAAAGATA GAGGAGTACA GGCAGATGGT CCTCACAGCC
CTGAACGCCA TCAGGAAGGA GCAGGAGATC GAAGAGGTGA CCCCTGCCAT GGCGCCTGTT
GAAACTGAGG TGCCTGCGGA TGCCGGCAAA CCTCTTGGCG AAGAGGAGAT GCTGGACTCT
CAACTGGCCC CGACTGCGCC AAGGGGTTCC GACTCTCGAC TAAGTCAAGA GGTTTCGACG
GAGTCGAAGC TAGTCGAAGC ACGTCGAGAT GTTTCGAGGG GGTCGATGCA CCACCCGGCT
CGCGGAAAGA CACCCGTAGA ATATGAAAAG GATACCGAAA CCGAATTACA CCGACCATAC
ACCAGACCGC AGCCCAGCAG GAGAAAACAA ACGGGATCTA AACGCATAAG CAGCCTGATC
GACCTAGATG ACGATGATGT CGAGGAGATA GATATCTGA
|
|---|
| Protein sequence | MMYSREVARR VFLEELRRSD LSFREGDDSQ YAPQYLLTPT GARCNRVFVV GTLIDRDDIG
EEVEYWRGRL ADPTGSILIY AGQYQPEASR VLAEIEIPAF VAVVGKPSVY ETEDGKKITS
IRAEAIQKVD LDTRNKWIME AARRTLERLE LMRSIDVPHN TDFQPGTMYH PEATTLEDCK
KAMGHYSTKI EEYRQMVLTA LNAIRKEQEI EEVTPAMAPV ETEVPADAGK PLGEEEMLDS
QLAPTAPRGS DSRLSQEVST ESKLVEARRD VSRGSMHHPA RGKTPVEYEK DTETELHRPY
TRPQPSRRKQ TGSKRISSLI DLDDDDVEEI DI
|
|---|
| |