| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1354 |
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| Symbol | |
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| ID | 4462850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | - |
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| Start bp | 1455170 |
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| End bp | 1456036 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639700370 |
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| Product | shikimate kinase |
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| Protein accession | YP_843769 |
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| Protein GI | 116754651 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1685] Archaeal shikimate kinase |
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| TIGRFAM ID | [TIGR01920] shikimate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.45392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGGAT ACGCCACTGC ATACGGCGCA GCAACTGTGC TGAACGCCAT CGCGAACTGG
AAGGGCTCTG CGTTCGGAAT ATCGCTCCGA ACATCAGCAG AGGTTGTGCT CGACGATTCT
GAGGGTGTGA GAGGGGATGT GGAAGGCATC GATACCACGC TCATCGTAAG ATGTGTTGAG
AGTGTGTTGA GCCATTTCGA TCTCGATTAC GGGGGTGTTG TGAGGACGAG AAGCGAGATA
CCGGTCGCAA GCGGTCTGAA GTCGAGCAGT GCTGCTGCAA ACGCCGCGGT TCTCGCTACC
GTGGATGCAC TGGGCGAGGA GATCGATATG ATCGATGCGG TGCGCATTGG GGTCGAGGCG
GCTCTCGACG CAGGCGTCAC GGTGACCGGT GCGTTCGATG ACGCGTGCGC CTCCATGCTC
GGCGGTGTTG TGGTGACGGA CAATTTGAAG AGATGTCTCC TGAAAAGAGA TGAGCTTCAC
TCAGATGTGG TGCTCCTCAT CCCTGAGGAA CAGTTCTTCT CCAGAGATGT TGACGTGGAG
AGGTGCAGAG CGCTCTCCAG GGTTGCTGAT GCTGTGTTTG AGATGGCGAT TGAGGGGGAT
TATGCAGGAG CGATGACACT GAACGGGCTA CTGTACTGCA CAGCGCTCCG CAGGTCTCCG
GAGCCGATCG TCCTTGCGCT CAGGGCTGGT GCAGCCGGAG CGACTCTCTC CGGCACCGGA
CCAGCATACG CTGCACTCGT CGATGATATC TCAGGAGATG ATGTTGTGGA GGCATGGTCA
TCTCTCGGCG GAAGGATCAT AAGGGCAGCG GTTGAGAACA GAAGCGCCAG GATGGGGCAG
GCGGATCTCT TTCAGGAGGG GATATGA
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| Protein sequence | MRGYATAYGA ATVLNAIANW KGSAFGISLR TSAEVVLDDS EGVRGDVEGI DTTLIVRCVE
SVLSHFDLDY GGVVRTRSEI PVASGLKSSS AAANAAVLAT VDALGEEIDM IDAVRIGVEA
ALDAGVTVTG AFDDACASML GGVVVTDNLK RCLLKRDELH SDVVLLIPEE QFFSRDVDVE
RCRALSRVAD AVFEMAIEGD YAGAMTLNGL LYCTALRRSP EPIVLALRAG AAGATLSGTG
PAYAALVDDI SGDDVVEAWS SLGGRIIRAA VENRSARMGQ ADLFQEGI
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