Gene Mthe_1330 details

Gene Information

• Locus tag: Mthe_1330
• ID: 4462136
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosaeta thermophila PT
• Kingdom: Archaea
• Replicon accession: NC_008553
• Strand: +
• Start bp: 1435293
• End bp: 1435880
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 639700347
• Product: phosphatidylserine decarboxylase related protein
• Protein accession: YP_843746
• Protein GI: 116754628
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0688] Phosphatidylserine decarboxylase
• TIGRFAM ID: [TIGR00164] phosphatidylserine decarboxylase precursor-related protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGCTTAA GGCTCGCCCC GGGATCGCTG CCATGGGTTG TAACACCATT CGCAGCATCC 
CTTATGATCT ACCCGTTCAG CACCGCGCTT TCACTGATCT TTTTGTTCGT AACGGCTTTC 
ATGATACACT TCCACCGCGA TCCTGAGAGG TTTCCTGAGG GGGAAGGCAT GCTCTCACCG 
GCGGATGGGA GGATAGTCGA GGCAGATGAA AAACACATTT ACATATTCAT GGGGCCGATG 
GATGTTCACG TTAACAGAGC ACCCCTGGAT GGAGTGGTCA GGAGCGTCGA GTTTCGTGGC 
GGAGATCACT CGCCCGCGTT CCGTCACCCC CTCAAGAACG CGCACAGCAT CATCGAGATC 
GAGAGCGAGA TGGGGCGCTT CACGCTGAAG CAGATCTCCG GAATGGCCGC CAGAAGAGTG 
GTCTGCTGGG TATCACCCGG CGACAGGCTG AGGCGCGGCC AGAGGATAGG CATGATCAGA 
TTCGGATCGG GAGTGATAGT CACGGCCCCA CCGGGATACA GGATCATCGC GCGAAAGGGA 
TCCAGGGTCC GCGCCGGCCA GACCGTGATA GCGGAGCTGA GGGAATGA 

 

Protein sequence

MSLRLAPGSL PWVVTPFAAS LMIYPFSTAL SLIFLFVTAF MIHFHRDPER FPEGEGMLSP 
ADGRIVEADE KHIYIFMGPM DVHVNRAPLD GVVRSVEFRG GDHSPAFRHP LKNAHSIIEI 
ESEMGRFTLK QISGMAARRV VCWVSPGDRL RRGQRIGMIR FGSGVIVTAP PGYRIIARKG 
SRVRAGQTVI AELRE