Gene Mthe_1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_1320 
Symbol 
ID4462187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp1428052 
End bp1428435 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content54% 
IMG OID639700339 
Productnucleotide binding protein, PINc 
Protein accessionYP_843738 
Protein GI116754620 
COG category[R] General function prediction only 
COG ID[COG1412] Uncharacterized proteins of PilT N-term./Vapc superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.443284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGGTAC TCCTGGATAC AAATGCGCTG ATGATGCCCG AGCAGTTCGG CGTCGATATA 
TTCTCCGAGC TCGAGAGACT GGGGTACTTC GATTATATCG TTCCAACAGC TGTGGTCAGA
GAGCTCAGGG CGATCTCGAA GTTTGCAGAA AAAGGAAAAG ACAAACGTGC TGCGAGTGTT
GCGCTCGGCC TCCTTTCCAG ATGCAGAGTC GTGGATGCAG ATGGTGTGGC GGACGACGTC
CTGGAGAGGC TGGCATCAGA GACAGGAGCC GCGGTGCTCA CAGGAGATAA GGAGCTCAGG
AAAAGATTAT CTAAAAGAGG CATCACGGTA ATCTACCTGC GCCAGAGCCA GTACCTCGAG
ATCGATGCGC AGGGGAGGTT CTGA
 
Protein sequence
MKVLLDTNAL MMPEQFGVDI FSELERLGYF DYIVPTAVVR ELRAISKFAE KGKDKRAASV 
ALGLLSRCRV VDADGVADDV LERLASETGA AVLTGDKELR KRLSKRGITV IYLRQSQYLE
IDAQGRF