Gene Mthe_1206 details

Gene Information

• Locus tag: Mthe_1206
• ID: 4462348
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosaeta thermophila PT
• Kingdom: Archaea
• Replicon accession: NC_008553
• Strand: +
• Start bp: 1301280
• End bp: 1303313
• Gene Length: 2034 bp
• Protein Length: 677 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 639700224
• Product: carbohydrate-binding and sugar hydrolysis
• Protein accession: YP_843627
• Protein GI: 116754509
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3420] Nitrous oxidase accessory protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGCTCG TTCTTTGTGC AATCATGCTG ATTCTCCTCA TTCCGTCTGA GGGGCGCGTG 
ATAAGGGTCG ATGATGACGG CGGCGCTGAT TTCTCCAGCA TTCAGGATGC TCTTGCCCTG 
GCAGGGGATG GCGATATAAT AGAGGTGATG AGCGGGGTTT ATGCGGAGAG CGTGAACATA 
ACAAAGTCAG TATGTGTGCG AGGGGTCGAC TCAGGAGAGG GCCTTCCTGT CCTGGACGGA 
GGCGGCCTGG ATGGTTTTGT TGCCTCATCA GATGGCGTTA ACGTGAGCGA ATTCATCATA 
ACGAATGCGA GCGCGTGGGG CGCAGCGGGC ATCAGGGTTC TCTCAGAGAA CGCGCTCATA 
TCAAGATGCA ACGTGAGCGA CTCGTTCGCT GGTGTTCTCC TGCTAGGCGG GAACGGATCT 
GTTGTTGATT GCAATGTAAC CGAATGCCAC TTCGCCGGAA TTGTGGCTGC ATCCTCTCGT 
AATACCGTGA AAATGAACAG GGCACATGAG AACAACAATG CCGGTATCCT CATTCTAAGA 
TCAGATGAGA ATCTCGTGGA AGGCAACGAT GCGAGCTACA ACCTCGGAAG CGGGATAAAG 
GTTTACAAAT CAAACGATTG TGTTGTAAGA AACAACACTG CAGATACTAA TGATTACGGG 
ATAGTGCTCT CCGAGTCTCA TAGATGCACT GTTGAGGGCA ACATCCTCGA GAACAACGAT 
TACGGCATAT ACCCATACCT CTCCTCCACG AACACCATAT CCAGAAACAC CGCGAGGACG 
AACGATTATG CTGTATACCT TTACAGCTCC TGGAATAACA CCATCACAGA AAACGACCTC 
AGGATGAATG ATGCATACGG AATTCTGATA TACTATTCAG ATAATAATAC GATCTCATCG 
AATGATCTGA GATCAAACGA GATCGGCGGG CTGAGCGTGA GGGGTTCCAG AGGCAACAGA 
TTATGCGGAA ACATGATGGG CGACAGCCCA TATTCGCTCC ACATTGAGGA CGCGGAGTTC 
AATATCGCAG AAGGAAACCG GATAAGCAAT GGCGAGACTG GAATCATTCT TGAGAGGTCA 
ATGAACAACA CTCTCTCCGG CAACACAATC TCTGAGACGC TTACAGGGAT ATCGGTCTCA 
TCTGGCCGAG GGAATATCAT TGAAGGGAAT AACCTCACGG GATGTAGACT CGGCATAGAG 
GCGAACGCAT CCATCGGGAG CATAATATCA GCGAACATCA TCGAGAGATG CGATCTGTGC 
GTTCATCTCC TCCACTCTCC GGCCTCCAGG CTCGAGGGCA ACATCATCAG GCAGGGCAGC 
TCAGGGGTGC TCGTCGAGGC GTCCGATGGT TTTGCAGCGG TCGATAACAC GTTCGATGGT 
GTGCCCAGAG CAATTACCAT CACTGCATCC CACGGCTCCC GGGTATCGAA CAGCAGCATA 
ACCGGAGCTG ACACCGCGAT TCTCGTGAAC TCCTCTGAAG AGGTGGTGGT GGAGGGCAAC 
AGCATGAGCA ACTCCACTGA GGGCATCAGG CTCCTCGCAT CATATGATAC AGAGATCGCC 
GGGAACGTCA TCACAGGCGC TAAGAACGGA ATCATCCTGG ACGAATCGAA TGAAAACACA 
ATCGAGGAGA ATAACATCTC GAGATGCAAC AGCGGGATCA CGCTCTCACG CTCCTGGAGG 
AACGTTCTGA TGATGAATAA CATCTCATAC AACACCAACG GCCTGGTGCT GGATGAGGGC 
ATGTATCCCA TAGAGTCAAG CGAGAATCAG ATCTACCTCA ACAGCTTCGT TCAGAACAGA 
AACGATGTCG TCTCATACAT ATCGAGCAAT TTCTGGAGCT CTCCCACGAG CATTCGATAC 
ATCTATCGCG GCAGGAGCTT CGAGAGCCGG ATGGGCAACT ACTGGCACGG TTTGGAGGGG 
GAGGACAGGA ACGGCGATGG GATACTGGAC AGTGGCAGGA GCGTTGGCCT CGAGGACGAC 
CCCTATCCGC TCGCAGAGCC TCCGGAGAGG TACAGGGTGC TCTCAGGCGT GTGA 

 

Protein sequence

MRLVLCAIML ILLIPSEGRV IRVDDDGGAD FSSIQDALAL AGDGDIIEVM SGVYAESVNI 
TKSVCVRGVD SGEGLPVLDG GGLDGFVASS DGVNVSEFII TNASAWGAAG IRVLSENALI 
SRCNVSDSFA GVLLLGGNGS VVDCNVTECH FAGIVAASSR NTVKMNRAHE NNNAGILILR 
SDENLVEGND ASYNLGSGIK VYKSNDCVVR NNTADTNDYG IVLSESHRCT VEGNILENND 
YGIYPYLSST NTISRNTART NDYAVYLYSS WNNTITENDL RMNDAYGILI YYSDNNTISS 
NDLRSNEIGG LSVRGSRGNR LCGNMMGDSP YSLHIEDAEF NIAEGNRISN GETGIILERS 
MNNTLSGNTI SETLTGISVS SGRGNIIEGN NLTGCRLGIE ANASIGSIIS ANIIERCDLC 
VHLLHSPASR LEGNIIRQGS SGVLVEASDG FAAVDNTFDG VPRAITITAS HGSRVSNSSI 
TGADTAILVN SSEEVVVEGN SMSNSTEGIR LLASYDTEIA GNVITGAKNG IILDESNENT 
IEENNISRCN SGITLSRSWR NVLMMNNISY NTNGLVLDEG MYPIESSENQ IYLNSFVQNR 
NDVVSYISSN FWSSPTSIRY IYRGRSFESR MGNYWHGLEG EDRNGDGILD SGRSVGLEDD 
PYPLAEPPER YRVLSGV